Gene : Cagra.1725s0022 C. grandiflora v1.1

Defline:  (1 of 1) PTHR32227:SF73 - CARBOHYDRATE-BINDING X8 DOMAIN-CONTAINING PROTEIN Genomic Order:  22
Name:  ? Cagra.1725s0022 Secondary Identifier:  ? PAC:28896071

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1725s0022 0.5kb upstream 0.5kb upstream 1988 true Scaffold1725: 87275-89262 Capsella grandiflora
Cagra.1725s0022 0.5kb upstream 0.5kb upstream 500 false Scaffold1725: 88763-89262 Capsella grandiflora
Cagra.1725s0022 0.5kb downstream 0.5kb downstream 1988 true Scaffold1725: 86775-88762 Capsella grandiflora
Cagra.1725s0022 0.5kb downstream 0.5kb downstream 500 false Scaffold1725: 86775-87274 Capsella grandiflora
Cagra.1725s0022 1.0kb upstream 1.0kb upstream 2488 true Scaffold1725: 87275-89762 Capsella grandiflora
Cagra.1725s0022 1.0kb upstream 1.0kb upstream 1000 false Scaffold1725: 88763-89762 Capsella grandiflora
Cagra.1725s0022 1.0kb downstream 1.0kb downstream 2488 true Scaffold1725: 86275-88762 Capsella grandiflora
Cagra.1725s0022 1.0kb downstream 1.0kb downstream 1000 false Scaffold1725: 86275-87274 Capsella grandiflora
Cagra.1725s0022 2.0kb upstream 2.0kb upstream 3488 true Scaffold1725: 87275-90762 Capsella grandiflora
Cagra.1725s0022 2.0kb upstream 2.0kb upstream 2000 false Scaffold1725: 88763-90762 Capsella grandiflora
Cagra.1725s0022 2.0kb downstream 2.0kb downstream 3488 true Scaffold1725: 85275-88762 Capsella grandiflora
Cagra.1725s0022 2.0kb downstream 2.0kb downstream 2000 false Scaffold1725: 85275-87274 Capsella grandiflora
Cagra.1725s0022 5.0kb upstream 5.0kb upstream 6488 true Scaffold1725: 87275-93762 Capsella grandiflora
Cagra.1725s0022 5.0kb upstream 5.0kb upstream 5000 false Scaffold1725: 88763-93762 Capsella grandiflora
Cagra.1725s0022 5.0kb downstream 5.0kb downstream 6488 true Scaffold1725: 82275-88762 Capsella grandiflora
Cagra.1725s0022 5.0kb downstream 5.0kb downstream 5000 false Scaffold1725: 82275-87274 Capsella grandiflora
Cagra.1725s0022 10.0kb upstream 10.0kb upstream 11488 true Scaffold1725: 87275-98762 Capsella grandiflora
Cagra.1725s0022 10.0kb upstream 10.0kb upstream 10000 false Scaffold1725: 88763-98762 Capsella grandiflora
Cagra.1725s0022 10.0kb downstream 10.0kb downstream 11488 true Scaffold1725: 77275-88762 Capsella grandiflora
Cagra.1725s0022 10.0kb downstream 10.0kb downstream 10000 false Scaffold1725: 77275-87274 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366660 5261 Brassicaceae View MSA
123828734 5264 Brassicales-Malvales View MSA
124350283 5266 SBM View MSA
124242272 5268 Malvidae View MSA
124062139 5270 Rosid View MSA
123753343 5271 Pentapetalae View MSA
122794093 5272 Eudicot View MSA
122050272 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121349342 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain