Gene : Cagra.1725s0037 C. grandiflora v1.1
Defline:  (1 of 4) PTHR13832:SF286 - PROTEIN PHOSPHATASE 2C 33-RELATED Genomic Order:  37
Name:  ? Cagra.1725s0037 Secondary Identifier:  ? PAC:28896116
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1725s0037 0.5kb upstream 0.5kb upstream 3772 true Scaffold1725: 149615-153386 Capsella grandiflora
Cagra.1725s0037 0.5kb upstream 0.5kb upstream 500 false Scaffold1725: 152887-153386 Capsella grandiflora
Cagra.1725s0037 0.5kb downstream 0.5kb downstream 3772 true Scaffold1725: 149115-152886 Capsella grandiflora
Cagra.1725s0037 0.5kb downstream 0.5kb downstream 500 false Scaffold1725: 149115-149614 Capsella grandiflora
Cagra.1725s0037 1.0kb upstream 1.0kb upstream 4272 true Scaffold1725: 149615-153886 Capsella grandiflora
Cagra.1725s0037 1.0kb upstream 1.0kb upstream 1000 false Scaffold1725: 152887-153886 Capsella grandiflora
Cagra.1725s0037 1.0kb downstream 1.0kb downstream 4272 true Scaffold1725: 148615-152886 Capsella grandiflora
Cagra.1725s0037 1.0kb downstream 1.0kb downstream 1000 false Scaffold1725: 148615-149614 Capsella grandiflora
Cagra.1725s0037 2.0kb upstream 2.0kb upstream 5272 true Scaffold1725: 149615-154886 Capsella grandiflora
Cagra.1725s0037 2.0kb upstream 2.0kb upstream 2000 false Scaffold1725: 152887-154886 Capsella grandiflora
Cagra.1725s0037 2.0kb downstream 2.0kb downstream 5272 true Scaffold1725: 147615-152886 Capsella grandiflora
Cagra.1725s0037 2.0kb downstream 2.0kb downstream 2000 false Scaffold1725: 147615-149614 Capsella grandiflora
Cagra.1725s0037 5.0kb upstream 5.0kb upstream 8272 true Scaffold1725: 149615-157886 Capsella grandiflora
Cagra.1725s0037 5.0kb upstream 5.0kb upstream 5000 false Scaffold1725: 152887-157886 Capsella grandiflora
Cagra.1725s0037 5.0kb downstream 5.0kb downstream 8272 true Scaffold1725: 144615-152886 Capsella grandiflora
Cagra.1725s0037 5.0kb downstream 5.0kb downstream 5000 false Scaffold1725: 144615-149614 Capsella grandiflora
Cagra.1725s0037 10.0kb upstream 10.0kb upstream 13272 true Scaffold1725: 149615-162886 Capsella grandiflora
Cagra.1725s0037 10.0kb upstream 10.0kb upstream 10000 false Scaffold1725: 152887-162886 Capsella grandiflora
Cagra.1725s0037 10.0kb downstream 10.0kb downstream 13272 true Scaffold1725: 139615-152886 Capsella grandiflora
Cagra.1725s0037 10.0kb downstream 10.0kb downstream 10000 false Scaffold1725: 139615-149614 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362395 5261 Brassicaceae View MSA
123837854 5264 Brassicales-Malvales View MSA
124338188 5266 SBM View MSA
124238908 5268 Malvidae View MSA
124068066 5270 Rosid View MSA
123751353 5271 Pentapetalae View MSA
122793781 5272 Eudicot View MSA
122043983 5273 Angiosperm View MSA
121350683 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain