Gene : Cagra.1671s0383 C. grandiflora v1.1
Defline:  (1 of 2) PTHR21726//PTHR21726:SF39 - PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED Genomic Order:  383
Name:  ? Cagra.1671s0383 Secondary Identifier:  ? PAC:28914027
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0383 0.5kb upstream 0.5kb upstream 2934 true Scaffold1671: 1373425-1376358 Capsella grandiflora
Cagra.1671s0383 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 1375859-1376358 Capsella grandiflora
Cagra.1671s0383 0.5kb downstream 0.5kb downstream 2934 true Scaffold1671: 1372925-1375858 Capsella grandiflora
Cagra.1671s0383 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 1372925-1373424 Capsella grandiflora
Cagra.1671s0383 1.0kb upstream 1.0kb upstream 3434 true Scaffold1671: 1373425-1376858 Capsella grandiflora
Cagra.1671s0383 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 1375859-1376858 Capsella grandiflora
Cagra.1671s0383 1.0kb downstream 1.0kb downstream 3434 true Scaffold1671: 1372425-1375858 Capsella grandiflora
Cagra.1671s0383 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 1372425-1373424 Capsella grandiflora
Cagra.1671s0383 2.0kb upstream 2.0kb upstream 4434 true Scaffold1671: 1373425-1377858 Capsella grandiflora
Cagra.1671s0383 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 1375859-1377858 Capsella grandiflora
Cagra.1671s0383 2.0kb downstream 2.0kb downstream 4434 true Scaffold1671: 1371425-1375858 Capsella grandiflora
Cagra.1671s0383 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 1371425-1373424 Capsella grandiflora
Cagra.1671s0383 5.0kb upstream 5.0kb upstream 7434 true Scaffold1671: 1373425-1380858 Capsella grandiflora
Cagra.1671s0383 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 1375859-1380858 Capsella grandiflora
Cagra.1671s0383 5.0kb downstream 5.0kb downstream 7434 true Scaffold1671: 1368425-1375858 Capsella grandiflora
Cagra.1671s0383 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 1368425-1373424 Capsella grandiflora
Cagra.1671s0383 10.0kb upstream 10.0kb upstream 12434 true Scaffold1671: 1373425-1385858 Capsella grandiflora
Cagra.1671s0383 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 1375859-1385858 Capsella grandiflora
Cagra.1671s0383 10.0kb downstream 10.0kb downstream 12434 true Scaffold1671: 1363425-1375858 Capsella grandiflora
Cagra.1671s0383 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 1363425-1373424 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373681 5261 Brassicaceae View MSA
123800599 5264 Brassicales-Malvales View MSA
124297997 5266 SBM View MSA
124149747 5268 Malvidae View MSA
123875492 5270 Rosid View MSA
123753280 5271 Pentapetalae View MSA
122795143 5272 Eudicot View MSA
122044494 5273 Angiosperm View MSA
121350314 5274 Embryophyte View MSA
123381675 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain