Gene : Cagra.1681s0021 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10625:SF120 - HISTONE DEACETYLASE 15 Genomic Order:  21
Name:  ? Cagra.1681s0021 Secondary Identifier:  ? PAC:28905286
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1681s0021 0.5kb upstream 0.5kb upstream 4595 true Scaffold1681: 69347-73941 Capsella grandiflora
Cagra.1681s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold1681: 69347-69846 Capsella grandiflora
Cagra.1681s0021 0.5kb downstream 0.5kb downstream 4595 true Scaffold1681: 69847-74441 Capsella grandiflora
Cagra.1681s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold1681: 73942-74441 Capsella grandiflora
Cagra.1681s0021 1.0kb upstream 1.0kb upstream 5095 true Scaffold1681: 68847-73941 Capsella grandiflora
Cagra.1681s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold1681: 68847-69846 Capsella grandiflora
Cagra.1681s0021 1.0kb downstream 1.0kb downstream 5095 true Scaffold1681: 69847-74941 Capsella grandiflora
Cagra.1681s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold1681: 73942-74941 Capsella grandiflora
Cagra.1681s0021 2.0kb upstream 2.0kb upstream 6095 true Scaffold1681: 67847-73941 Capsella grandiflora
Cagra.1681s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold1681: 67847-69846 Capsella grandiflora
Cagra.1681s0021 2.0kb downstream 2.0kb downstream 6095 true Scaffold1681: 69847-75941 Capsella grandiflora
Cagra.1681s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold1681: 73942-75941 Capsella grandiflora
Cagra.1681s0021 5.0kb upstream 5.0kb upstream 9095 true Scaffold1681: 64847-73941 Capsella grandiflora
Cagra.1681s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold1681: 64847-69846 Capsella grandiflora
Cagra.1681s0021 5.0kb downstream 5.0kb downstream 9095 true Scaffold1681: 69847-78941 Capsella grandiflora
Cagra.1681s0021 5.0kb downstream 5.0kb downstream 5000 false Scaffold1681: 73942-78941 Capsella grandiflora
Cagra.1681s0021 10.0kb upstream 10.0kb upstream 14095 true Scaffold1681: 59847-73941 Capsella grandiflora
Cagra.1681s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold1681: 59847-69846 Capsella grandiflora
Cagra.1681s0021 10.0kb downstream 10.0kb downstream 14095 true Scaffold1681: 69847-83941 Capsella grandiflora
Cagra.1681s0021 10.0kb downstream 10.0kb downstream 10000 false Scaffold1681: 73942-83941 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363743 5261 Brassicaceae View MSA
123828744 5264 Brassicales-Malvales View MSA
124341729 5266 SBM View MSA
124237775 5268 Malvidae View MSA
124065591 5270 Rosid View MSA
123741307 5271 Pentapetalae View MSA
122792610 5272 Eudicot View MSA
122044856 5273 Angiosperm View MSA
121349302 5274 Embryophyte View MSA
123428156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain