Gene : Cagra.1681s0026 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10302:SF3 - SINGLE-STRANDED DNA-BINDING PROTEIN Genomic Order:  26
Name:  ? Cagra.1681s0026 Secondary Identifier:  ? PAC:28905254
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1681s0026 0.5kb upstream 0.5kb upstream 1931 true Scaffold1681: 97319-99249 Capsella grandiflora
Cagra.1681s0026 0.5kb upstream 0.5kb upstream 500 false Scaffold1681: 98750-99249 Capsella grandiflora
Cagra.1681s0026 0.5kb downstream 0.5kb downstream 1931 true Scaffold1681: 96819-98749 Capsella grandiflora
Cagra.1681s0026 0.5kb downstream 0.5kb downstream 500 false Scaffold1681: 96819-97318 Capsella grandiflora
Cagra.1681s0026 1.0kb upstream 1.0kb upstream 2431 true Scaffold1681: 97319-99749 Capsella grandiflora
Cagra.1681s0026 1.0kb upstream 1.0kb upstream 1000 false Scaffold1681: 98750-99749 Capsella grandiflora
Cagra.1681s0026 1.0kb downstream 1.0kb downstream 2431 true Scaffold1681: 96319-98749 Capsella grandiflora
Cagra.1681s0026 1.0kb downstream 1.0kb downstream 1000 false Scaffold1681: 96319-97318 Capsella grandiflora
Cagra.1681s0026 2.0kb upstream 2.0kb upstream 3431 true Scaffold1681: 97319-100749 Capsella grandiflora
Cagra.1681s0026 2.0kb upstream 2.0kb upstream 2000 false Scaffold1681: 98750-100749 Capsella grandiflora
Cagra.1681s0026 2.0kb downstream 2.0kb downstream 3431 true Scaffold1681: 95319-98749 Capsella grandiflora
Cagra.1681s0026 2.0kb downstream 2.0kb downstream 2000 false Scaffold1681: 95319-97318 Capsella grandiflora
Cagra.1681s0026 5.0kb upstream 5.0kb upstream 6431 true Scaffold1681: 97319-103749 Capsella grandiflora
Cagra.1681s0026 5.0kb upstream 5.0kb upstream 5000 false Scaffold1681: 98750-103749 Capsella grandiflora
Cagra.1681s0026 5.0kb downstream 5.0kb downstream 6431 true Scaffold1681: 92319-98749 Capsella grandiflora
Cagra.1681s0026 5.0kb downstream 5.0kb downstream 5000 false Scaffold1681: 92319-97318 Capsella grandiflora
Cagra.1681s0026 10.0kb upstream 10.0kb upstream 11431 true Scaffold1681: 97319-108749 Capsella grandiflora
Cagra.1681s0026 10.0kb upstream 10.0kb upstream 10000 false Scaffold1681: 98750-108749 Capsella grandiflora
Cagra.1681s0026 10.0kb downstream 10.0kb downstream 11431 true Scaffold1681: 87319-98749 Capsella grandiflora
Cagra.1681s0026 10.0kb downstream 10.0kb downstream 10000 false Scaffold1681: 87319-97318 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371351 5261 Brassicaceae View MSA
123840531 5264 Brassicales-Malvales View MSA
124339671 5266 SBM View MSA
124240971 5268 Malvidae View MSA
124065076 5270 Rosid View MSA
123739023 5271 Pentapetalae View MSA
122787839 5272 Eudicot View MSA
122045301 5273 Angiosperm View MSA
121349645 5274 Embryophyte View MSA
123381385 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain