Gene : Cagra.1681s0049 C. grandiflora v1.1
Defline:  (1 of 1) KOG3068 - mRNA splicing factor Genomic Order:  49
Name:  ? Cagra.1681s0049 Secondary Identifier:  ? PAC:28905301
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1681s0049 0.5kb upstream 0.5kb upstream 2394 true Scaffold1681: 180827-183220 Capsella grandiflora
Cagra.1681s0049 0.5kb upstream 0.5kb upstream 500 false Scaffold1681: 180827-181326 Capsella grandiflora
Cagra.1681s0049 0.5kb downstream 0.5kb downstream 2394 true Scaffold1681: 181327-183720 Capsella grandiflora
Cagra.1681s0049 0.5kb downstream 0.5kb downstream 500 false Scaffold1681: 183221-183720 Capsella grandiflora
Cagra.1681s0049 1.0kb upstream 1.0kb upstream 2894 true Scaffold1681: 180327-183220 Capsella grandiflora
Cagra.1681s0049 1.0kb upstream 1.0kb upstream 1000 false Scaffold1681: 180327-181326 Capsella grandiflora
Cagra.1681s0049 1.0kb downstream 1.0kb downstream 2894 true Scaffold1681: 181327-184220 Capsella grandiflora
Cagra.1681s0049 1.0kb downstream 1.0kb downstream 1000 false Scaffold1681: 183221-184220 Capsella grandiflora
Cagra.1681s0049 2.0kb upstream 2.0kb upstream 3894 true Scaffold1681: 179327-183220 Capsella grandiflora
Cagra.1681s0049 2.0kb upstream 2.0kb upstream 2000 false Scaffold1681: 179327-181326 Capsella grandiflora
Cagra.1681s0049 2.0kb downstream 2.0kb downstream 3894 true Scaffold1681: 181327-185220 Capsella grandiflora
Cagra.1681s0049 2.0kb downstream 2.0kb downstream 2000 false Scaffold1681: 183221-185220 Capsella grandiflora
Cagra.1681s0049 5.0kb upstream 5.0kb upstream 6894 true Scaffold1681: 176327-183220 Capsella grandiflora
Cagra.1681s0049 5.0kb upstream 5.0kb upstream 5000 false Scaffold1681: 176327-181326 Capsella grandiflora
Cagra.1681s0049 5.0kb downstream 5.0kb downstream 6894 true Scaffold1681: 181327-188220 Capsella grandiflora
Cagra.1681s0049 5.0kb downstream 5.0kb downstream 5000 false Scaffold1681: 183221-188220 Capsella grandiflora
Cagra.1681s0049 10.0kb upstream 10.0kb upstream 11894 true Scaffold1681: 171327-183220 Capsella grandiflora
Cagra.1681s0049 10.0kb upstream 10.0kb upstream 10000 false Scaffold1681: 171327-181326 Capsella grandiflora
Cagra.1681s0049 10.0kb downstream 10.0kb downstream 11894 true Scaffold1681: 181327-193220 Capsella grandiflora
Cagra.1681s0049 10.0kb downstream 10.0kb downstream 10000 false Scaffold1681: 183221-193220 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363425 5261 Brassicaceae View MSA
123830844 5264 Brassicales-Malvales View MSA
124344468 5266 SBM View MSA
124240907 5268 Malvidae View MSA
124067488 5270 Rosid View MSA
123737510 5271 Pentapetalae View MSA
122786189 5272 Eudicot View MSA
122043978 5273 Angiosperm View MSA
121345749 5274 Embryophyte View MSA
123424977 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain