Gene : Cagra.1671s0296 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12858:SF2 - RIBOSOME BIOGENESIS PROTEIN BMS1 HOMOLOG Genomic Order:  296
Name:  ? Cagra.1671s0296 Secondary Identifier:  ? PAC:28913897
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0296 0.5kb upstream 0.5kb upstream 7491 true Scaffold1671: 1081189-1088679 Capsella grandiflora
Cagra.1671s0296 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 1088180-1088679 Capsella grandiflora
Cagra.1671s0296 0.5kb downstream 0.5kb downstream 7491 true Scaffold1671: 1080689-1088179 Capsella grandiflora
Cagra.1671s0296 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 1080689-1081188 Capsella grandiflora
Cagra.1671s0296 1.0kb upstream 1.0kb upstream 7991 true Scaffold1671: 1081189-1089179 Capsella grandiflora
Cagra.1671s0296 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 1088180-1089179 Capsella grandiflora
Cagra.1671s0296 1.0kb downstream 1.0kb downstream 7991 true Scaffold1671: 1080189-1088179 Capsella grandiflora
Cagra.1671s0296 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 1080189-1081188 Capsella grandiflora
Cagra.1671s0296 2.0kb upstream 2.0kb upstream 8991 true Scaffold1671: 1081189-1090179 Capsella grandiflora
Cagra.1671s0296 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 1088180-1090179 Capsella grandiflora
Cagra.1671s0296 2.0kb downstream 2.0kb downstream 8991 true Scaffold1671: 1079189-1088179 Capsella grandiflora
Cagra.1671s0296 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 1079189-1081188 Capsella grandiflora
Cagra.1671s0296 5.0kb upstream 5.0kb upstream 11991 true Scaffold1671: 1081189-1093179 Capsella grandiflora
Cagra.1671s0296 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 1088180-1093179 Capsella grandiflora
Cagra.1671s0296 5.0kb downstream 5.0kb downstream 11991 true Scaffold1671: 1076189-1088179 Capsella grandiflora
Cagra.1671s0296 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 1076189-1081188 Capsella grandiflora
Cagra.1671s0296 10.0kb upstream 10.0kb upstream 16991 true Scaffold1671: 1081189-1098179 Capsella grandiflora
Cagra.1671s0296 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 1088180-1098179 Capsella grandiflora
Cagra.1671s0296 10.0kb downstream 10.0kb downstream 16991 true Scaffold1671: 1071189-1088179 Capsella grandiflora
Cagra.1671s0296 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 1071189-1081188 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374557 5261 Brassicaceae View MSA
123830730 5264 Brassicales-Malvales View MSA
124344337 5266 SBM View MSA
124247347 5268 Malvidae View MSA
124068054 5270 Rosid View MSA
123746170 5271 Pentapetalae View MSA
122788558 5272 Eudicot View MSA
122050261 5273 Angiosperm View MSA
121345125 5274 Embryophyte View MSA
123424272 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain