Gene : Cagra.1671s0307 C. grandiflora v1.1
Defline:  (1 of 4) PTHR27003:SF36 - LEUCINE-RICH REPEAT PROTEIN KINASE-LIKE PROTEIN Genomic Order:  307
Name:  ? Cagra.1671s0307 Secondary Identifier:  ? PAC:28914269
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0307 0.5kb upstream 0.5kb upstream 6327 true Scaffold1671: 1120401-1126727 Capsella grandiflora
Cagra.1671s0307 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 1126228-1126727 Capsella grandiflora
Cagra.1671s0307 0.5kb downstream 0.5kb downstream 6327 true Scaffold1671: 1119901-1126227 Capsella grandiflora
Cagra.1671s0307 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 1119901-1120400 Capsella grandiflora
Cagra.1671s0307 1.0kb upstream 1.0kb upstream 6827 true Scaffold1671: 1120401-1127227 Capsella grandiflora
Cagra.1671s0307 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 1126228-1127227 Capsella grandiflora
Cagra.1671s0307 1.0kb downstream 1.0kb downstream 6827 true Scaffold1671: 1119401-1126227 Capsella grandiflora
Cagra.1671s0307 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 1119401-1120400 Capsella grandiflora
Cagra.1671s0307 2.0kb upstream 2.0kb upstream 7827 true Scaffold1671: 1120401-1128227 Capsella grandiflora
Cagra.1671s0307 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 1126228-1128227 Capsella grandiflora
Cagra.1671s0307 2.0kb downstream 2.0kb downstream 7827 true Scaffold1671: 1118401-1126227 Capsella grandiflora
Cagra.1671s0307 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 1118401-1120400 Capsella grandiflora
Cagra.1671s0307 5.0kb upstream 5.0kb upstream 10827 true Scaffold1671: 1120401-1131227 Capsella grandiflora
Cagra.1671s0307 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 1126228-1131227 Capsella grandiflora
Cagra.1671s0307 5.0kb downstream 5.0kb downstream 10827 true Scaffold1671: 1115401-1126227 Capsella grandiflora
Cagra.1671s0307 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 1115401-1120400 Capsella grandiflora
Cagra.1671s0307 10.0kb upstream 10.0kb upstream 15827 true Scaffold1671: 1120401-1136227 Capsella grandiflora
Cagra.1671s0307 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 1126228-1136227 Capsella grandiflora
Cagra.1671s0307 10.0kb downstream 10.0kb downstream 15827 true Scaffold1671: 1110401-1126227 Capsella grandiflora
Cagra.1671s0307 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 1110401-1120400 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364368 5261 Brassicaceae View MSA
123834959 5264 Brassicales-Malvales View MSA
124337870 5266 SBM View MSA
124250402 5268 Malvidae View MSA
124062074 5270 Rosid View MSA
123750521 5271 Pentapetalae View MSA
122786028 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain