Gene : Cagra.1671s0312 C. grandiflora v1.1
Defline:  (1 of 20) PTHR21717 - TELOMERIC REPEAT BINDING PROTEIN Genomic Order:  312
Name:  ? Cagra.1671s0312 Secondary Identifier:  ? PAC:28913918
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0312 0.5kb upstream 0.5kb upstream 3593 true Scaffold1671: 1142800-1146392 Capsella grandiflora
Cagra.1671s0312 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 1142800-1143299 Capsella grandiflora
Cagra.1671s0312 0.5kb downstream 0.5kb downstream 3593 true Scaffold1671: 1143300-1146892 Capsella grandiflora
Cagra.1671s0312 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 1146393-1146892 Capsella grandiflora
Cagra.1671s0312 1.0kb upstream 1.0kb upstream 4093 true Scaffold1671: 1142300-1146392 Capsella grandiflora
Cagra.1671s0312 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 1142300-1143299 Capsella grandiflora
Cagra.1671s0312 1.0kb downstream 1.0kb downstream 4093 true Scaffold1671: 1143300-1147392 Capsella grandiflora
Cagra.1671s0312 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 1146393-1147392 Capsella grandiflora
Cagra.1671s0312 2.0kb upstream 2.0kb upstream 5093 true Scaffold1671: 1141300-1146392 Capsella grandiflora
Cagra.1671s0312 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 1141300-1143299 Capsella grandiflora
Cagra.1671s0312 2.0kb downstream 2.0kb downstream 5093 true Scaffold1671: 1143300-1148392 Capsella grandiflora
Cagra.1671s0312 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 1146393-1148392 Capsella grandiflora
Cagra.1671s0312 5.0kb upstream 5.0kb upstream 8093 true Scaffold1671: 1138300-1146392 Capsella grandiflora
Cagra.1671s0312 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 1138300-1143299 Capsella grandiflora
Cagra.1671s0312 5.0kb downstream 5.0kb downstream 8093 true Scaffold1671: 1143300-1151392 Capsella grandiflora
Cagra.1671s0312 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 1146393-1151392 Capsella grandiflora
Cagra.1671s0312 10.0kb upstream 10.0kb upstream 13093 true Scaffold1671: 1133300-1146392 Capsella grandiflora
Cagra.1671s0312 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 1133300-1143299 Capsella grandiflora
Cagra.1671s0312 10.0kb downstream 10.0kb downstream 13093 true Scaffold1671: 1143300-1156392 Capsella grandiflora
Cagra.1671s0312 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 1146393-1156392 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364924 5261 Brassicaceae View MSA
123798861 5264 Brassicales-Malvales View MSA
124350491 5266 SBM View MSA
124247952 5268 Malvidae View MSA
124067542 5270 Rosid View MSA
123751765 5271 Pentapetalae View MSA
122796417 5272 Eudicot View MSA
122048444 5273 Angiosperm View MSA
121347141 5274 Embryophyte View MSA
123425851 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain