Gene : Cagra.1671s0330 C. grandiflora v1.1
Defline:  (1 of 6) PTHR13234 - GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE GILT Genomic Order:  330
Name:  ? Cagra.1671s0330 Secondary Identifier:  ? PAC:28914220
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0330 0.5kb upstream 0.5kb upstream 2603 true Scaffold1671: 1191960-1194562 Capsella grandiflora
Cagra.1671s0330 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 1191960-1192459 Capsella grandiflora
Cagra.1671s0330 0.5kb downstream 0.5kb downstream 2603 true Scaffold1671: 1192460-1195062 Capsella grandiflora
Cagra.1671s0330 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 1194563-1195062 Capsella grandiflora
Cagra.1671s0330 1.0kb upstream 1.0kb upstream 3103 true Scaffold1671: 1191460-1194562 Capsella grandiflora
Cagra.1671s0330 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 1191460-1192459 Capsella grandiflora
Cagra.1671s0330 1.0kb downstream 1.0kb downstream 3103 true Scaffold1671: 1192460-1195562 Capsella grandiflora
Cagra.1671s0330 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 1194563-1195562 Capsella grandiflora
Cagra.1671s0330 2.0kb upstream 2.0kb upstream 4103 true Scaffold1671: 1190460-1194562 Capsella grandiflora
Cagra.1671s0330 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 1190460-1192459 Capsella grandiflora
Cagra.1671s0330 2.0kb downstream 2.0kb downstream 4103 true Scaffold1671: 1192460-1196562 Capsella grandiflora
Cagra.1671s0330 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 1194563-1196562 Capsella grandiflora
Cagra.1671s0330 5.0kb upstream 5.0kb upstream 7103 true Scaffold1671: 1187460-1194562 Capsella grandiflora
Cagra.1671s0330 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 1187460-1192459 Capsella grandiflora
Cagra.1671s0330 5.0kb downstream 5.0kb downstream 7103 true Scaffold1671: 1192460-1199562 Capsella grandiflora
Cagra.1671s0330 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 1194563-1199562 Capsella grandiflora
Cagra.1671s0330 10.0kb upstream 10.0kb upstream 12103 true Scaffold1671: 1182460-1194562 Capsella grandiflora
Cagra.1671s0330 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 1182460-1192459 Capsella grandiflora
Cagra.1671s0330 10.0kb downstream 10.0kb downstream 12103 true Scaffold1671: 1192460-1204562 Capsella grandiflora
Cagra.1671s0330 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 1194563-1204562 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378950 5261 Brassicaceae View MSA
123830064 5264 Brassicales-Malvales View MSA
124338067 5266 SBM View MSA
124248311 5268 Malvidae View MSA
124069226 5270 Rosid View MSA
123753662 5271 Pentapetalae View MSA
122787690 5272 Eudicot View MSA
122043804 5273 Angiosperm View MSA
121344699 5274 Embryophyte View MSA
123427496 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain