Gene : Cagra.1671s0349 C. grandiflora v1.1
Defline:  (1 of 1) KOG2227 - Pre-initiation complex, subunit CDC6, AAA+ superfamily ATPase Genomic Order:  349
Name:  ? Cagra.1671s0349 Secondary Identifier:  ? PAC:28914142
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0349 0.5kb upstream 0.5kb upstream 3759 true Scaffold1671: 1252126-1255884 Capsella grandiflora
Cagra.1671s0349 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 1255385-1255884 Capsella grandiflora
Cagra.1671s0349 0.5kb downstream 0.5kb downstream 3759 true Scaffold1671: 1251626-1255384 Capsella grandiflora
Cagra.1671s0349 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 1251626-1252125 Capsella grandiflora
Cagra.1671s0349 1.0kb upstream 1.0kb upstream 4259 true Scaffold1671: 1252126-1256384 Capsella grandiflora
Cagra.1671s0349 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 1255385-1256384 Capsella grandiflora
Cagra.1671s0349 1.0kb downstream 1.0kb downstream 4259 true Scaffold1671: 1251126-1255384 Capsella grandiflora
Cagra.1671s0349 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 1251126-1252125 Capsella grandiflora
Cagra.1671s0349 2.0kb upstream 2.0kb upstream 5259 true Scaffold1671: 1252126-1257384 Capsella grandiflora
Cagra.1671s0349 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 1255385-1257384 Capsella grandiflora
Cagra.1671s0349 2.0kb downstream 2.0kb downstream 5259 true Scaffold1671: 1250126-1255384 Capsella grandiflora
Cagra.1671s0349 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 1250126-1252125 Capsella grandiflora
Cagra.1671s0349 5.0kb upstream 5.0kb upstream 8259 true Scaffold1671: 1252126-1260384 Capsella grandiflora
Cagra.1671s0349 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 1255385-1260384 Capsella grandiflora
Cagra.1671s0349 5.0kb downstream 5.0kb downstream 8259 true Scaffold1671: 1247126-1255384 Capsella grandiflora
Cagra.1671s0349 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 1247126-1252125 Capsella grandiflora
Cagra.1671s0349 10.0kb upstream 10.0kb upstream 13259 true Scaffold1671: 1252126-1265384 Capsella grandiflora
Cagra.1671s0349 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 1255385-1265384 Capsella grandiflora
Cagra.1671s0349 10.0kb downstream 10.0kb downstream 13259 true Scaffold1671: 1242126-1255384 Capsella grandiflora
Cagra.1671s0349 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 1242126-1252125 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338241 5261 Brassicaceae View MSA
123835881 5264 Brassicales-Malvales View MSA
124337709 5266 SBM View MSA
124239687 5268 Malvidae View MSA
124062546 5270 Rosid View MSA
123739764 5271 Pentapetalae View MSA
122789561 5272 Eudicot View MSA
122043998 5273 Angiosperm View MSA
121345653 5274 Embryophyte View MSA
123426004 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain