Gene : Cagra.1671s0213 C. grandiflora v1.1
Defline:  (1 of 2) PTHR13793:SF100 - HISTONE-LYSINE N-METHYLTRANSFERASE ATX1-RELATED Genomic Order:  213
Name:  ? Cagra.1671s0213 Secondary Identifier:  ? PAC:28914307
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0213 0.5kb upstream 0.5kb upstream 8151 true Scaffold1671: 793689-801839 Capsella grandiflora
Cagra.1671s0213 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 793689-794188 Capsella grandiflora
Cagra.1671s0213 0.5kb downstream 0.5kb downstream 8151 true Scaffold1671: 794189-802339 Capsella grandiflora
Cagra.1671s0213 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 801840-802339 Capsella grandiflora
Cagra.1671s0213 1.0kb upstream 1.0kb upstream 8651 true Scaffold1671: 793189-801839 Capsella grandiflora
Cagra.1671s0213 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 793189-794188 Capsella grandiflora
Cagra.1671s0213 1.0kb downstream 1.0kb downstream 8651 true Scaffold1671: 794189-802839 Capsella grandiflora
Cagra.1671s0213 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 801840-802839 Capsella grandiflora
Cagra.1671s0213 2.0kb upstream 2.0kb upstream 9651 true Scaffold1671: 792189-801839 Capsella grandiflora
Cagra.1671s0213 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 792189-794188 Capsella grandiflora
Cagra.1671s0213 2.0kb downstream 2.0kb downstream 9651 true Scaffold1671: 794189-803839 Capsella grandiflora
Cagra.1671s0213 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 801840-803839 Capsella grandiflora
Cagra.1671s0213 5.0kb upstream 5.0kb upstream 12651 true Scaffold1671: 789189-801839 Capsella grandiflora
Cagra.1671s0213 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 789189-794188 Capsella grandiflora
Cagra.1671s0213 5.0kb downstream 5.0kb downstream 12651 true Scaffold1671: 794189-806839 Capsella grandiflora
Cagra.1671s0213 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 801840-806839 Capsella grandiflora
Cagra.1671s0213 10.0kb upstream 10.0kb upstream 17651 true Scaffold1671: 784189-801839 Capsella grandiflora
Cagra.1671s0213 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 784189-794188 Capsella grandiflora
Cagra.1671s0213 10.0kb downstream 10.0kb downstream 17651 true Scaffold1671: 794189-811839 Capsella grandiflora
Cagra.1671s0213 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 801840-811839 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371062 5261 Brassicaceae View MSA
123834361 5264 Brassicales-Malvales View MSA
124340150 5266 SBM View MSA
124240219 5268 Malvidae View MSA
124064853 5270 Rosid View MSA
123751890 5271 Pentapetalae View MSA
122797093 5272 Eudicot View MSA
122046345 5273 Angiosperm View MSA
121351412 5274 Embryophyte View MSA
123427373 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain