Gene : Cagra.1671s0260 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10909:SF11 - ACYL-COENZYME A OXIDASE-LIKE PROTEIN Genomic Order:  260
Name:  ? Cagra.1671s0260 Secondary Identifier:  ? PAC:28914175
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5136 Capsella grandiflora pathologic  
Cgrandiflora PWY-561 Capsella grandiflora pathologic  
Cgrandiflora PWY-6837 Capsella grandiflora pathologic  
Cgrandiflora PWY-735 Capsella grandiflora pathologic  
Cgrandiflora PWY-7606 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0260 0.5kb upstream 0.5kb upstream 4456 true Scaffold1671: 950041-954496 Capsella grandiflora
Cagra.1671s0260 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 950041-950540 Capsella grandiflora
Cagra.1671s0260 0.5kb downstream 0.5kb downstream 4456 true Scaffold1671: 950541-954996 Capsella grandiflora
Cagra.1671s0260 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 954497-954996 Capsella grandiflora
Cagra.1671s0260 1.0kb upstream 1.0kb upstream 4956 true Scaffold1671: 949541-954496 Capsella grandiflora
Cagra.1671s0260 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 949541-950540 Capsella grandiflora
Cagra.1671s0260 1.0kb downstream 1.0kb downstream 4956 true Scaffold1671: 950541-955496 Capsella grandiflora
Cagra.1671s0260 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 954497-955496 Capsella grandiflora
Cagra.1671s0260 2.0kb upstream 2.0kb upstream 5956 true Scaffold1671: 948541-954496 Capsella grandiflora
Cagra.1671s0260 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 948541-950540 Capsella grandiflora
Cagra.1671s0260 2.0kb downstream 2.0kb downstream 5956 true Scaffold1671: 950541-956496 Capsella grandiflora
Cagra.1671s0260 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 954497-956496 Capsella grandiflora
Cagra.1671s0260 5.0kb upstream 5.0kb upstream 8956 true Scaffold1671: 945541-954496 Capsella grandiflora
Cagra.1671s0260 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 945541-950540 Capsella grandiflora
Cagra.1671s0260 5.0kb downstream 5.0kb downstream 8956 true Scaffold1671: 950541-959496 Capsella grandiflora
Cagra.1671s0260 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 954497-959496 Capsella grandiflora
Cagra.1671s0260 10.0kb upstream 10.0kb upstream 13956 true Scaffold1671: 940541-954496 Capsella grandiflora
Cagra.1671s0260 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 940541-950540 Capsella grandiflora
Cagra.1671s0260 10.0kb downstream 10.0kb downstream 13956 true Scaffold1671: 950541-964496 Capsella grandiflora
Cagra.1671s0260 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 954497-964496 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370734 5261 Brassicaceae View MSA
123835956 5264 Brassicales-Malvales View MSA
124340146 5266 SBM View MSA
124237991 5268 Malvidae View MSA
124066099 5270 Rosid View MSA
123753780 5271 Pentapetalae View MSA
122787775 5272 Eudicot View MSA
122044984 5273 Angiosperm View MSA
121345610 5274 Embryophyte View MSA
123428252 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain