Gene : Cagra.1671s0254 C. grandiflora v1.1
Defline:  (1 of 3) PTHR22880:SF172 - TRANSCRIPTION FACTOR GTE3, CHLOROPLASTIC-RELATED Genomic Order:  254
Name:  ? Cagra.1671s0254 Secondary Identifier:  ? PAC:28914060
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0254 0.5kb upstream 0.5kb upstream 4374 true Scaffold1671: 932165-936538 Capsella grandiflora
Cagra.1671s0254 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 932165-932664 Capsella grandiflora
Cagra.1671s0254 0.5kb downstream 0.5kb downstream 4374 true Scaffold1671: 932665-937038 Capsella grandiflora
Cagra.1671s0254 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 936539-937038 Capsella grandiflora
Cagra.1671s0254 1.0kb upstream 1.0kb upstream 4874 true Scaffold1671: 931665-936538 Capsella grandiflora
Cagra.1671s0254 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 931665-932664 Capsella grandiflora
Cagra.1671s0254 1.0kb downstream 1.0kb downstream 4874 true Scaffold1671: 932665-937538 Capsella grandiflora
Cagra.1671s0254 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 936539-937538 Capsella grandiflora
Cagra.1671s0254 2.0kb upstream 2.0kb upstream 5874 true Scaffold1671: 930665-936538 Capsella grandiflora
Cagra.1671s0254 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 930665-932664 Capsella grandiflora
Cagra.1671s0254 2.0kb downstream 2.0kb downstream 5874 true Scaffold1671: 932665-938538 Capsella grandiflora
Cagra.1671s0254 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 936539-938538 Capsella grandiflora
Cagra.1671s0254 5.0kb upstream 5.0kb upstream 8874 true Scaffold1671: 927665-936538 Capsella grandiflora
Cagra.1671s0254 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 927665-932664 Capsella grandiflora
Cagra.1671s0254 5.0kb downstream 5.0kb downstream 8874 true Scaffold1671: 932665-941538 Capsella grandiflora
Cagra.1671s0254 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 936539-941538 Capsella grandiflora
Cagra.1671s0254 10.0kb upstream 10.0kb upstream 13874 true Scaffold1671: 922665-936538 Capsella grandiflora
Cagra.1671s0254 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 922665-932664 Capsella grandiflora
Cagra.1671s0254 10.0kb downstream 10.0kb downstream 13874 true Scaffold1671: 932665-946538 Capsella grandiflora
Cagra.1671s0254 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 936539-946538 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373121 5261 Brassicaceae View MSA
123832430 5264 Brassicales-Malvales View MSA
124337600 5266 SBM View MSA
124251085 5268 Malvidae View MSA
124062568 5270 Rosid View MSA
123750447 5271 Pentapetalae View MSA
122794064 5272 Eudicot View MSA
122046365 5273 Angiosperm View MSA
123429103 5275 Viridiplantae View MSA
121348953 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain