Gene : Cagra.1671s0119 C. grandiflora v1.1
Defline:  (1 of 3) PTHR12506:SF24 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED Genomic Order:  119
Name:  ? Cagra.1671s0119 Secondary Identifier:  ? PAC:28914252
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0119 0.5kb upstream 0.5kb upstream 3289 true Scaffold1671: 454408-457696 Capsella grandiflora
Cagra.1671s0119 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 457197-457696 Capsella grandiflora
Cagra.1671s0119 0.5kb downstream 0.5kb downstream 3289 true Scaffold1671: 453908-457196 Capsella grandiflora
Cagra.1671s0119 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 453908-454407 Capsella grandiflora
Cagra.1671s0119 1.0kb upstream 1.0kb upstream 3789 true Scaffold1671: 454408-458196 Capsella grandiflora
Cagra.1671s0119 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 457197-458196 Capsella grandiflora
Cagra.1671s0119 1.0kb downstream 1.0kb downstream 3789 true Scaffold1671: 453408-457196 Capsella grandiflora
Cagra.1671s0119 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 453408-454407 Capsella grandiflora
Cagra.1671s0119 2.0kb upstream 2.0kb upstream 4789 true Scaffold1671: 454408-459196 Capsella grandiflora
Cagra.1671s0119 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 457197-459196 Capsella grandiflora
Cagra.1671s0119 2.0kb downstream 2.0kb downstream 4789 true Scaffold1671: 452408-457196 Capsella grandiflora
Cagra.1671s0119 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 452408-454407 Capsella grandiflora
Cagra.1671s0119 5.0kb upstream 5.0kb upstream 7789 true Scaffold1671: 454408-462196 Capsella grandiflora
Cagra.1671s0119 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 457197-462196 Capsella grandiflora
Cagra.1671s0119 5.0kb downstream 5.0kb downstream 7789 true Scaffold1671: 449408-457196 Capsella grandiflora
Cagra.1671s0119 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 449408-454407 Capsella grandiflora
Cagra.1671s0119 10.0kb upstream 10.0kb upstream 12789 true Scaffold1671: 454408-467196 Capsella grandiflora
Cagra.1671s0119 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 457197-467196 Capsella grandiflora
Cagra.1671s0119 10.0kb downstream 10.0kb downstream 12789 true Scaffold1671: 444408-457196 Capsella grandiflora
Cagra.1671s0119 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 444408-454407 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362451 5261 Brassicaceae View MSA
123840275 5264 Brassicales-Malvales View MSA
124337037 5266 SBM View MSA
124252146 5268 Malvidae View MSA
124063144 5270 Rosid View MSA
123743724 5271 Pentapetalae View MSA
122789792 5272 Eudicot View MSA
122050864 5273 Angiosperm View MSA
121352088 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain