Gene : Cagra.1671s0131 C. grandiflora v1.1
Defline:  (1 of 46) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  131
Name:  ? Cagra.1671s0131 Secondary Identifier:  ? PAC:28914009
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0131 0.5kb upstream 0.5kb upstream 2108 true Scaffold1671: 490767-492874 Capsella grandiflora
Cagra.1671s0131 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 490767-491266 Capsella grandiflora
Cagra.1671s0131 0.5kb downstream 0.5kb downstream 2108 true Scaffold1671: 491267-493374 Capsella grandiflora
Cagra.1671s0131 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 492875-493374 Capsella grandiflora
Cagra.1671s0131 1.0kb upstream 1.0kb upstream 2608 true Scaffold1671: 490267-492874 Capsella grandiflora
Cagra.1671s0131 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 490267-491266 Capsella grandiflora
Cagra.1671s0131 1.0kb downstream 1.0kb downstream 2608 true Scaffold1671: 491267-493874 Capsella grandiflora
Cagra.1671s0131 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 492875-493874 Capsella grandiflora
Cagra.1671s0131 2.0kb upstream 2.0kb upstream 3608 true Scaffold1671: 489267-492874 Capsella grandiflora
Cagra.1671s0131 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 489267-491266 Capsella grandiflora
Cagra.1671s0131 2.0kb downstream 2.0kb downstream 3608 true Scaffold1671: 491267-494874 Capsella grandiflora
Cagra.1671s0131 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 492875-494874 Capsella grandiflora
Cagra.1671s0131 5.0kb upstream 5.0kb upstream 6608 true Scaffold1671: 486267-492874 Capsella grandiflora
Cagra.1671s0131 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 486267-491266 Capsella grandiflora
Cagra.1671s0131 5.0kb downstream 5.0kb downstream 6608 true Scaffold1671: 491267-497874 Capsella grandiflora
Cagra.1671s0131 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 492875-497874 Capsella grandiflora
Cagra.1671s0131 10.0kb upstream 10.0kb upstream 11608 true Scaffold1671: 481267-492874 Capsella grandiflora
Cagra.1671s0131 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 481267-491266 Capsella grandiflora
Cagra.1671s0131 10.0kb downstream 10.0kb downstream 11608 true Scaffold1671: 491267-502874 Capsella grandiflora
Cagra.1671s0131 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 492875-502874 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510836 5273 Angiosperm View MSA
122368837 5261 Brassicaceae View MSA
123799664 5264 Brassicales-Malvales View MSA
124297160 5266 SBM View MSA
124149118 5268 Malvidae View MSA
123874988 5270 Rosid View MSA
123458879 5271 Pentapetalae View MSA
122494276 5272 Eudicot View MSA
120783912 5274 Embryophyte View MSA
122825870 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain