Gene : Cagra.1671s0144 C. grandiflora v1.1
Defline:  (1 of 9) KOG0484 - Transcription factor PHOX2/ARIX, contains HOX domain Genomic Order:  144
Name:  ? Cagra.1671s0144 Secondary Identifier:  ? PAC:28914074
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0144 0.5kb upstream 0.5kb upstream 6793 true Scaffold1671: 540753-547545 Capsella grandiflora
Cagra.1671s0144 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 547046-547545 Capsella grandiflora
Cagra.1671s0144 0.5kb downstream 0.5kb downstream 6793 true Scaffold1671: 540253-547045 Capsella grandiflora
Cagra.1671s0144 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 540253-540752 Capsella grandiflora
Cagra.1671s0144 1.0kb upstream 1.0kb upstream 7293 true Scaffold1671: 540753-548045 Capsella grandiflora
Cagra.1671s0144 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 547046-548045 Capsella grandiflora
Cagra.1671s0144 1.0kb downstream 1.0kb downstream 7293 true Scaffold1671: 539753-547045 Capsella grandiflora
Cagra.1671s0144 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 539753-540752 Capsella grandiflora
Cagra.1671s0144 2.0kb upstream 2.0kb upstream 8293 true Scaffold1671: 540753-549045 Capsella grandiflora
Cagra.1671s0144 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 547046-549045 Capsella grandiflora
Cagra.1671s0144 2.0kb downstream 2.0kb downstream 8293 true Scaffold1671: 538753-547045 Capsella grandiflora
Cagra.1671s0144 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 538753-540752 Capsella grandiflora
Cagra.1671s0144 5.0kb upstream 5.0kb upstream 11293 true Scaffold1671: 540753-552045 Capsella grandiflora
Cagra.1671s0144 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 547046-552045 Capsella grandiflora
Cagra.1671s0144 5.0kb downstream 5.0kb downstream 11293 true Scaffold1671: 535753-547045 Capsella grandiflora
Cagra.1671s0144 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 535753-540752 Capsella grandiflora
Cagra.1671s0144 10.0kb upstream 10.0kb upstream 16293 true Scaffold1671: 540753-557045 Capsella grandiflora
Cagra.1671s0144 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 547046-557045 Capsella grandiflora
Cagra.1671s0144 10.0kb downstream 10.0kb downstream 16293 true Scaffold1671: 530753-547045 Capsella grandiflora
Cagra.1671s0144 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 530753-540752 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377813 5261 Brassicaceae View MSA
123836464 5264 Brassicales-Malvales View MSA
124338113 5266 SBM View MSA
124238235 5268 Malvidae View MSA
124067525 5270 Rosid View MSA
123744207 5271 Pentapetalae View MSA
122795649 5272 Eudicot View MSA
122043712 5273 Angiosperm View MSA
121350910 5274 Embryophyte View MSA
123381934 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain