Gene : Cagra.1671s0025 C. grandiflora v1.1
Defline:  (1 of 1) PTHR17204:SF5 - PRE-MRNA-PROCESSING FACTOR 39 Genomic Order:  25
Name:  ? Cagra.1671s0025 Secondary Identifier:  ? PAC:28913937
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0025 0.5kb upstream 0.5kb upstream 5594 true Scaffold1671: 76292-81885 Capsella grandiflora
Cagra.1671s0025 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 76292-76791 Capsella grandiflora
Cagra.1671s0025 0.5kb downstream 0.5kb downstream 5594 true Scaffold1671: 76792-82385 Capsella grandiflora
Cagra.1671s0025 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 81886-82385 Capsella grandiflora
Cagra.1671s0025 1.0kb upstream 1.0kb upstream 6094 true Scaffold1671: 75792-81885 Capsella grandiflora
Cagra.1671s0025 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 75792-76791 Capsella grandiflora
Cagra.1671s0025 1.0kb downstream 1.0kb downstream 6094 true Scaffold1671: 76792-82885 Capsella grandiflora
Cagra.1671s0025 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 81886-82885 Capsella grandiflora
Cagra.1671s0025 2.0kb upstream 2.0kb upstream 7094 true Scaffold1671: 74792-81885 Capsella grandiflora
Cagra.1671s0025 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 74792-76791 Capsella grandiflora
Cagra.1671s0025 2.0kb downstream 2.0kb downstream 7094 true Scaffold1671: 76792-83885 Capsella grandiflora
Cagra.1671s0025 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 81886-83885 Capsella grandiflora
Cagra.1671s0025 5.0kb upstream 5.0kb upstream 10094 true Scaffold1671: 71792-81885 Capsella grandiflora
Cagra.1671s0025 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 71792-76791 Capsella grandiflora
Cagra.1671s0025 5.0kb downstream 5.0kb downstream 10094 true Scaffold1671: 76792-86885 Capsella grandiflora
Cagra.1671s0025 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 81886-86885 Capsella grandiflora
Cagra.1671s0025 10.0kb upstream 10.0kb upstream 15094 true Scaffold1671: 66792-81885 Capsella grandiflora
Cagra.1671s0025 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 66792-76791 Capsella grandiflora
Cagra.1671s0025 10.0kb downstream 10.0kb downstream 15094 true Scaffold1671: 76792-91885 Capsella grandiflora
Cagra.1671s0025 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 81886-91885 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377912 5261 Brassicaceae View MSA
123837374 5264 Brassicales-Malvales View MSA
124338956 5266 SBM View MSA
124238962 5268 Malvidae View MSA
124068897 5270 Rosid View MSA
123746236 5271 Pentapetalae View MSA
122794509 5272 Eudicot View MSA
122048891 5273 Angiosperm View MSA
121349849 5274 Embryophyte View MSA
123426942 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain