Gene : Cagra.1671s0023 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22884//PTHR22884:SF366 - SET DOMAIN PROTEINS Genomic Order:  23
Name:  ? Cagra.1671s0023 Secondary Identifier:  ? PAC:28914334
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0023 0.5kb upstream 0.5kb upstream 3963 true Scaffold1671: 71233-75195 Capsella grandiflora
Cagra.1671s0023 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 74696-75195 Capsella grandiflora
Cagra.1671s0023 0.5kb downstream 0.5kb downstream 3963 true Scaffold1671: 70733-74695 Capsella grandiflora
Cagra.1671s0023 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 70733-71232 Capsella grandiflora
Cagra.1671s0023 1.0kb upstream 1.0kb upstream 4463 true Scaffold1671: 71233-75695 Capsella grandiflora
Cagra.1671s0023 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 74696-75695 Capsella grandiflora
Cagra.1671s0023 1.0kb downstream 1.0kb downstream 4463 true Scaffold1671: 70233-74695 Capsella grandiflora
Cagra.1671s0023 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 70233-71232 Capsella grandiflora
Cagra.1671s0023 2.0kb upstream 2.0kb upstream 5463 true Scaffold1671: 71233-76695 Capsella grandiflora
Cagra.1671s0023 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 74696-76695 Capsella grandiflora
Cagra.1671s0023 2.0kb downstream 2.0kb downstream 5463 true Scaffold1671: 69233-74695 Capsella grandiflora
Cagra.1671s0023 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 69233-71232 Capsella grandiflora
Cagra.1671s0023 5.0kb upstream 5.0kb upstream 8463 true Scaffold1671: 71233-79695 Capsella grandiflora
Cagra.1671s0023 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 74696-79695 Capsella grandiflora
Cagra.1671s0023 5.0kb downstream 5.0kb downstream 8463 true Scaffold1671: 66233-74695 Capsella grandiflora
Cagra.1671s0023 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 66233-71232 Capsella grandiflora
Cagra.1671s0023 10.0kb upstream 10.0kb upstream 13463 true Scaffold1671: 71233-84695 Capsella grandiflora
Cagra.1671s0023 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 74696-84695 Capsella grandiflora
Cagra.1671s0023 10.0kb downstream 10.0kb downstream 13463 true Scaffold1671: 61233-74695 Capsella grandiflora
Cagra.1671s0023 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 61233-71232 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343537 5261 Brassicaceae View MSA
123837337 5264 Brassicales-Malvales View MSA
124342613 5266 SBM View MSA
124241937 5268 Malvidae View MSA
124073861 5270 Rosid View MSA
123746063 5271 Pentapetalae View MSA
122795414 5272 Eudicot View MSA
122049912 5273 Angiosperm View MSA
123428946 5275 Viridiplantae View MSA
121350319 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain