Gene : Cagra.1671s0031 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22874:SF4 - TRANSDUCIN/WD-40 REPEAT-CONTAINING PROTEIN-RELATED Genomic Order:  31
Name:  ? Cagra.1671s0031 Secondary Identifier:  ? PAC:28914302
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0031 0.5kb upstream 0.5kb upstream 5494 true Scaffold1671: 102243-107736 Capsella grandiflora
Cagra.1671s0031 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 107237-107736 Capsella grandiflora
Cagra.1671s0031 0.5kb downstream 0.5kb downstream 5494 true Scaffold1671: 101743-107236 Capsella grandiflora
Cagra.1671s0031 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 101743-102242 Capsella grandiflora
Cagra.1671s0031 1.0kb upstream 1.0kb upstream 5994 true Scaffold1671: 102243-108236 Capsella grandiflora
Cagra.1671s0031 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 107237-108236 Capsella grandiflora
Cagra.1671s0031 1.0kb downstream 1.0kb downstream 5994 true Scaffold1671: 101243-107236 Capsella grandiflora
Cagra.1671s0031 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 101243-102242 Capsella grandiflora
Cagra.1671s0031 2.0kb upstream 2.0kb upstream 6994 true Scaffold1671: 102243-109236 Capsella grandiflora
Cagra.1671s0031 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 107237-109236 Capsella grandiflora
Cagra.1671s0031 2.0kb downstream 2.0kb downstream 6994 true Scaffold1671: 100243-107236 Capsella grandiflora
Cagra.1671s0031 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 100243-102242 Capsella grandiflora
Cagra.1671s0031 5.0kb upstream 5.0kb upstream 9994 true Scaffold1671: 102243-112236 Capsella grandiflora
Cagra.1671s0031 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 107237-112236 Capsella grandiflora
Cagra.1671s0031 5.0kb downstream 5.0kb downstream 9994 true Scaffold1671: 97243-107236 Capsella grandiflora
Cagra.1671s0031 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 97243-102242 Capsella grandiflora
Cagra.1671s0031 10.0kb upstream 10.0kb upstream 14994 true Scaffold1671: 102243-117236 Capsella grandiflora
Cagra.1671s0031 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 107237-117236 Capsella grandiflora
Cagra.1671s0031 10.0kb downstream 10.0kb downstream 14994 true Scaffold1671: 92243-107236 Capsella grandiflora
Cagra.1671s0031 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 92243-102242 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380654 5261 Brassicaceae View MSA
123839592 5264 Brassicales-Malvales View MSA
124347683 5266 SBM View MSA
124246956 5268 Malvidae View MSA
124072284 5270 Rosid View MSA
123744540 5271 Pentapetalae View MSA
122788668 5272 Eudicot View MSA
122045725 5273 Angiosperm View MSA
121344183 5274 Embryophyte View MSA
123426396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain