Gene : Cagra.1671s0026 C. grandiflora v1.1
Defline:  (1 of 4) PTHR17204//PTHR17204:SF30 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED Genomic Order:  26
Name:  ? Cagra.1671s0026 Secondary Identifier:  ? PAC:28914206
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0026 0.5kb upstream 0.5kb upstream 2603 true Scaffold1671: 81904-84506 Capsella grandiflora
Cagra.1671s0026 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 81904-82403 Capsella grandiflora
Cagra.1671s0026 0.5kb downstream 0.5kb downstream 2603 true Scaffold1671: 82404-85006 Capsella grandiflora
Cagra.1671s0026 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 84507-85006 Capsella grandiflora
Cagra.1671s0026 1.0kb upstream 1.0kb upstream 3103 true Scaffold1671: 81404-84506 Capsella grandiflora
Cagra.1671s0026 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 81404-82403 Capsella grandiflora
Cagra.1671s0026 1.0kb downstream 1.0kb downstream 3103 true Scaffold1671: 82404-85506 Capsella grandiflora
Cagra.1671s0026 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 84507-85506 Capsella grandiflora
Cagra.1671s0026 2.0kb upstream 2.0kb upstream 4103 true Scaffold1671: 80404-84506 Capsella grandiflora
Cagra.1671s0026 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 80404-82403 Capsella grandiflora
Cagra.1671s0026 2.0kb downstream 2.0kb downstream 4103 true Scaffold1671: 82404-86506 Capsella grandiflora
Cagra.1671s0026 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 84507-86506 Capsella grandiflora
Cagra.1671s0026 5.0kb upstream 5.0kb upstream 7103 true Scaffold1671: 77404-84506 Capsella grandiflora
Cagra.1671s0026 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 77404-82403 Capsella grandiflora
Cagra.1671s0026 5.0kb downstream 5.0kb downstream 7103 true Scaffold1671: 82404-89506 Capsella grandiflora
Cagra.1671s0026 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 84507-89506 Capsella grandiflora
Cagra.1671s0026 10.0kb upstream 10.0kb upstream 12103 true Scaffold1671: 72404-84506 Capsella grandiflora
Cagra.1671s0026 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 72404-82403 Capsella grandiflora
Cagra.1671s0026 10.0kb downstream 10.0kb downstream 12103 true Scaffold1671: 82404-94506 Capsella grandiflora
Cagra.1671s0026 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 84507-94506 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373779 5261 Brassicaceae View MSA
123838577 5264 Brassicales-Malvales View MSA
124349595 5266 SBM View MSA
124246914 5268 Malvidae View MSA
124072128 5270 Rosid View MSA
123746638 5271 Pentapetalae View MSA
122792580 5272 Eudicot View MSA
122047878 5273 Angiosperm View MSA
121349100 5274 Embryophyte View MSA
123426825 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain