Gene : Cagra.1671s0039 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31561:SF25 - 3-KETOACYL-COA SYNTHASE 17-RELATED Genomic Order:  39
Name:  ? Cagra.1671s0039 Secondary Identifier:  ? PAC:28913885
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5080 Capsella grandiflora pathologic  
Cgrandiflora PWY-6433 Capsella grandiflora pathologic  
Cgrandiflora PWY-6598 Capsella grandiflora pathologic  
Cgrandiflora PWY-7036 Capsella grandiflora pathologic  
Cgrandiflora PWY-7601 Capsella grandiflora pathologic  
Cgrandiflora PWY-7619 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0039 0.5kb upstream 0.5kb upstream 3519 true Scaffold1671: 151684-155202 Capsella grandiflora
Cagra.1671s0039 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 154703-155202 Capsella grandiflora
Cagra.1671s0039 0.5kb downstream 0.5kb downstream 3519 true Scaffold1671: 151184-154702 Capsella grandiflora
Cagra.1671s0039 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 151184-151683 Capsella grandiflora
Cagra.1671s0039 1.0kb upstream 1.0kb upstream 4019 true Scaffold1671: 151684-155702 Capsella grandiflora
Cagra.1671s0039 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 154703-155702 Capsella grandiflora
Cagra.1671s0039 1.0kb downstream 1.0kb downstream 4019 true Scaffold1671: 150684-154702 Capsella grandiflora
Cagra.1671s0039 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 150684-151683 Capsella grandiflora
Cagra.1671s0039 2.0kb upstream 2.0kb upstream 5019 true Scaffold1671: 151684-156702 Capsella grandiflora
Cagra.1671s0039 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 154703-156702 Capsella grandiflora
Cagra.1671s0039 2.0kb downstream 2.0kb downstream 5019 true Scaffold1671: 149684-154702 Capsella grandiflora
Cagra.1671s0039 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 149684-151683 Capsella grandiflora
Cagra.1671s0039 5.0kb upstream 5.0kb upstream 8019 true Scaffold1671: 151684-159702 Capsella grandiflora
Cagra.1671s0039 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 154703-159702 Capsella grandiflora
Cagra.1671s0039 5.0kb downstream 5.0kb downstream 8019 true Scaffold1671: 146684-154702 Capsella grandiflora
Cagra.1671s0039 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 146684-151683 Capsella grandiflora
Cagra.1671s0039 10.0kb upstream 10.0kb upstream 13019 true Scaffold1671: 151684-164702 Capsella grandiflora
Cagra.1671s0039 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 154703-164702 Capsella grandiflora
Cagra.1671s0039 10.0kb downstream 10.0kb downstream 13019 true Scaffold1671: 141684-154702 Capsella grandiflora
Cagra.1671s0039 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 141684-151683 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372090 5261 Brassicaceae View MSA
123800293 5264 Brassicales-Malvales View MSA
124297724 5266 SBM View MSA
124246495 5268 Malvidae View MSA
124070809 5270 Rosid View MSA
123743172 5271 Pentapetalae View MSA
122795166 5272 Eudicot View MSA
122051961 5273 Angiosperm View MSA
121349296 5274 Embryophyte View MSA
123425974 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain