Gene : Cagra.1671s0047 C. grandiflora v1.1
Defline:  (1 of 1) KOG3584 - cAMP response element binding protein and related transcription factors Genomic Order:  47
Name:  ? Cagra.1671s0047 Secondary Identifier:  ? PAC:28913934
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0047 0.5kb upstream 0.5kb upstream 6343 true Scaffold1671: 180737-187079 Capsella grandiflora
Cagra.1671s0047 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 186580-187079 Capsella grandiflora
Cagra.1671s0047 0.5kb downstream 0.5kb downstream 6343 true Scaffold1671: 180237-186579 Capsella grandiflora
Cagra.1671s0047 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 180237-180736 Capsella grandiflora
Cagra.1671s0047 1.0kb upstream 1.0kb upstream 6843 true Scaffold1671: 180737-187579 Capsella grandiflora
Cagra.1671s0047 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 186580-187579 Capsella grandiflora
Cagra.1671s0047 1.0kb downstream 1.0kb downstream 6843 true Scaffold1671: 179737-186579 Capsella grandiflora
Cagra.1671s0047 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 179737-180736 Capsella grandiflora
Cagra.1671s0047 2.0kb upstream 2.0kb upstream 7843 true Scaffold1671: 180737-188579 Capsella grandiflora
Cagra.1671s0047 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 186580-188579 Capsella grandiflora
Cagra.1671s0047 2.0kb downstream 2.0kb downstream 7843 true Scaffold1671: 178737-186579 Capsella grandiflora
Cagra.1671s0047 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 178737-180736 Capsella grandiflora
Cagra.1671s0047 5.0kb upstream 5.0kb upstream 10843 true Scaffold1671: 180737-191579 Capsella grandiflora
Cagra.1671s0047 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 186580-191579 Capsella grandiflora
Cagra.1671s0047 5.0kb downstream 5.0kb downstream 10843 true Scaffold1671: 175737-186579 Capsella grandiflora
Cagra.1671s0047 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 175737-180736 Capsella grandiflora
Cagra.1671s0047 10.0kb upstream 10.0kb upstream 15843 true Scaffold1671: 180737-196579 Capsella grandiflora
Cagra.1671s0047 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 186580-196579 Capsella grandiflora
Cagra.1671s0047 10.0kb downstream 10.0kb downstream 15843 true Scaffold1671: 170737-186579 Capsella grandiflora
Cagra.1671s0047 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 170737-180736 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377680 5261 Brassicaceae View MSA
123836050 5264 Brassicales-Malvales View MSA
124339994 5266 SBM View MSA
124247807 5268 Malvidae View MSA
124063906 5270 Rosid View MSA
123740151 5271 Pentapetalae View MSA
122794933 5272 Eudicot View MSA
122043519 5273 Angiosperm View MSA
121350769 5274 Embryophyte View MSA
123425613 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain