Gene : Cagra.1671s0077 C. grandiflora v1.1
Defline:  (1 of 1) 1.2.1.28//1.2.3.1//1.2.3.14//1.2.3.7 - Aldehyde oxidase / Retinal oxidase // Abscisic-aldehyde oxidase / AO-delta // Indole-3-acetaldehyde oxidase / Indoleacetaldehyde oxidase Genomic Order:  77
Name:  ? Cagra.1671s0077 Secondary Identifier:  ? PAC:28914150
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-695 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0077 0.5kb upstream 0.5kb upstream 6837 true Scaffold1671: 286435-293271 Capsella grandiflora
Cagra.1671s0077 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 292772-293271 Capsella grandiflora
Cagra.1671s0077 0.5kb downstream 0.5kb downstream 6837 true Scaffold1671: 285935-292771 Capsella grandiflora
Cagra.1671s0077 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 285935-286434 Capsella grandiflora
Cagra.1671s0077 1.0kb upstream 1.0kb upstream 7337 true Scaffold1671: 286435-293771 Capsella grandiflora
Cagra.1671s0077 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 292772-293771 Capsella grandiflora
Cagra.1671s0077 1.0kb downstream 1.0kb downstream 7337 true Scaffold1671: 285435-292771 Capsella grandiflora
Cagra.1671s0077 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 285435-286434 Capsella grandiflora
Cagra.1671s0077 2.0kb upstream 2.0kb upstream 8337 true Scaffold1671: 286435-294771 Capsella grandiflora
Cagra.1671s0077 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 292772-294771 Capsella grandiflora
Cagra.1671s0077 2.0kb downstream 2.0kb downstream 8337 true Scaffold1671: 284435-292771 Capsella grandiflora
Cagra.1671s0077 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 284435-286434 Capsella grandiflora
Cagra.1671s0077 5.0kb upstream 5.0kb upstream 11337 true Scaffold1671: 286435-297771 Capsella grandiflora
Cagra.1671s0077 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 292772-297771 Capsella grandiflora
Cagra.1671s0077 5.0kb downstream 5.0kb downstream 11337 true Scaffold1671: 281435-292771 Capsella grandiflora
Cagra.1671s0077 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 281435-286434 Capsella grandiflora
Cagra.1671s0077 10.0kb upstream 10.0kb upstream 16337 true Scaffold1671: 286435-302771 Capsella grandiflora
Cagra.1671s0077 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 292772-302771 Capsella grandiflora
Cagra.1671s0077 10.0kb downstream 10.0kb downstream 16337 true Scaffold1671: 276435-292771 Capsella grandiflora
Cagra.1671s0077 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 276435-286434 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372939 5261 Brassicaceae View MSA
123839082 5264 Brassicales-Malvales View MSA
124342435 5266 SBM View MSA
124239057 5268 Malvidae View MSA
124064752 5270 Rosid View MSA
123746349 5271 Pentapetalae View MSA
122793870 5272 Eudicot View MSA
122051504 5273 Angiosperm View MSA
121345384 5274 Embryophyte View MSA
123426829 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain