Gene : Cagra.1655s0053 C. grandiflora v1.1
Defline:  (1 of 3) PTHR32100:SF17 - OMEGA-3 FATTY ACID DESATURASE, ENDOPLASMIC RETICULUM Genomic Order:  53
Name:  ? Cagra.1655s0053 Secondary Identifier:  ? PAC:28902890
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1655s0053 0.5kb upstream 0.5kb upstream 3033 true Scaffold1655: 196448-199480 Capsella grandiflora
Cagra.1655s0053 0.5kb upstream 0.5kb upstream 500 false Scaffold1655: 198981-199480 Capsella grandiflora
Cagra.1655s0053 0.5kb downstream 0.5kb downstream 3033 true Scaffold1655: 195948-198980 Capsella grandiflora
Cagra.1655s0053 0.5kb downstream 0.5kb downstream 500 false Scaffold1655: 195948-196447 Capsella grandiflora
Cagra.1655s0053 1.0kb upstream 1.0kb upstream 3533 true Scaffold1655: 196448-199980 Capsella grandiflora
Cagra.1655s0053 1.0kb upstream 1.0kb upstream 1000 false Scaffold1655: 198981-199980 Capsella grandiflora
Cagra.1655s0053 1.0kb downstream 1.0kb downstream 3533 true Scaffold1655: 195448-198980 Capsella grandiflora
Cagra.1655s0053 1.0kb downstream 1.0kb downstream 1000 false Scaffold1655: 195448-196447 Capsella grandiflora
Cagra.1655s0053 2.0kb upstream 2.0kb upstream 4533 true Scaffold1655: 196448-200980 Capsella grandiflora
Cagra.1655s0053 2.0kb upstream 2.0kb upstream 2000 false Scaffold1655: 198981-200980 Capsella grandiflora
Cagra.1655s0053 2.0kb downstream 2.0kb downstream 4533 true Scaffold1655: 194448-198980 Capsella grandiflora
Cagra.1655s0053 2.0kb downstream 2.0kb downstream 2000 false Scaffold1655: 194448-196447 Capsella grandiflora
Cagra.1655s0053 5.0kb upstream 5.0kb upstream 7533 true Scaffold1655: 196448-203980 Capsella grandiflora
Cagra.1655s0053 5.0kb upstream 5.0kb upstream 5000 false Scaffold1655: 198981-203980 Capsella grandiflora
Cagra.1655s0053 5.0kb downstream 5.0kb downstream 7533 true Scaffold1655: 191448-198980 Capsella grandiflora
Cagra.1655s0053 5.0kb downstream 5.0kb downstream 5000 false Scaffold1655: 191448-196447 Capsella grandiflora
Cagra.1655s0053 10.0kb upstream 10.0kb upstream 12533 true Scaffold1655: 196448-208980 Capsella grandiflora
Cagra.1655s0053 10.0kb upstream 10.0kb upstream 10000 false Scaffold1655: 198981-208980 Capsella grandiflora
Cagra.1655s0053 10.0kb downstream 10.0kb downstream 12533 true Scaffold1655: 186448-198980 Capsella grandiflora
Cagra.1655s0053 10.0kb downstream 10.0kb downstream 10000 false Scaffold1655: 186448-196447 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367511 5261 Brassicaceae View MSA
123838789 5264 Brassicales-Malvales View MSA
124338417 5266 SBM View MSA
124240620 5268 Malvidae View MSA
124069335 5270 Rosid View MSA
123752062 5271 Pentapetalae View MSA
122788316 5272 Eudicot View MSA
122045494 5273 Angiosperm View MSA
121344489 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain