Gene : Cagra.1658s0011 C. grandiflora v1.1
Defline:  (1 of 137) PTHR31790:SF10 - F-BOX ASSOCIATED UBIQUITINATION EFFECTOR FAMILY PROTEIN-RELATED Genomic Order:  11
Name:  ? Cagra.1658s0011 Secondary Identifier:  ? PAC:28907205
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1658s0011 0.5kb upstream 0.5kb upstream 8878 true Scaffold1658: 30243-39120 Capsella grandiflora
Cagra.1658s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold1658: 38621-39120 Capsella grandiflora
Cagra.1658s0011 0.5kb downstream 0.5kb downstream 8878 true Scaffold1658: 29743-38620 Capsella grandiflora
Cagra.1658s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold1658: 29743-30242 Capsella grandiflora
Cagra.1658s0011 1.0kb upstream 1.0kb upstream 9378 true Scaffold1658: 30243-39620 Capsella grandiflora
Cagra.1658s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold1658: 38621-39620 Capsella grandiflora
Cagra.1658s0011 1.0kb downstream 1.0kb downstream 9378 true Scaffold1658: 29243-38620 Capsella grandiflora
Cagra.1658s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold1658: 29243-30242 Capsella grandiflora
Cagra.1658s0011 2.0kb upstream 2.0kb upstream 10378 true Scaffold1658: 30243-40620 Capsella grandiflora
Cagra.1658s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold1658: 38621-40620 Capsella grandiflora
Cagra.1658s0011 2.0kb downstream 2.0kb downstream 10378 true Scaffold1658: 28243-38620 Capsella grandiflora
Cagra.1658s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold1658: 28243-30242 Capsella grandiflora
Cagra.1658s0011 5.0kb upstream 5.0kb upstream 13378 true Scaffold1658: 30243-43620 Capsella grandiflora
Cagra.1658s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold1658: 38621-43620 Capsella grandiflora
Cagra.1658s0011 5.0kb downstream 5.0kb downstream 13378 true Scaffold1658: 25243-38620 Capsella grandiflora
Cagra.1658s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold1658: 25243-30242 Capsella grandiflora
Cagra.1658s0011 10.0kb upstream 10.0kb upstream 14369 true Scaffold1658: 30243-44611 Capsella grandiflora
Cagra.1658s0011 10.0kb upstream 10.0kb upstream 5991 false Scaffold1658: 38621-44611 Capsella grandiflora
Cagra.1658s0011 10.0kb downstream 10.0kb downstream 18378 true Scaffold1658: 20243-38620 Capsella grandiflora
Cagra.1658s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold1658: 20243-30242 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121499741 5273 Angiosperm View MSA
122338600 5261 Brassicaceae View MSA
123779157 5264 Brassicales-Malvales View MSA
124277487 5266 SBM View MSA
124132684 5268 Malvidae View MSA
123860959 5270 Rosid View MSA
123446537 5271 Pentapetalae View MSA
122482087 5272 Eudicot View MSA
120773078 5274 Embryophyte View MSA
122815402 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain