Gene : Cagra.1671s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23222:SF1 - PROHIBITIN-2 Genomic Order:  2
Name:  ? Cagra.1671s0002 Secondary Identifier:  ? PAC:28914123
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0002 0.5kb upstream 0.5kb upstream 2870 true Scaffold1671: 2440-5309 Capsella grandiflora
Cagra.1671s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 4810-5309 Capsella grandiflora
Cagra.1671s0002 0.5kb downstream 0.5kb downstream 2870 true Scaffold1671: 1940-4809 Capsella grandiflora
Cagra.1671s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 1940-2439 Capsella grandiflora
Cagra.1671s0002 1.0kb upstream 1.0kb upstream 3370 true Scaffold1671: 2440-5809 Capsella grandiflora
Cagra.1671s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 4810-5809 Capsella grandiflora
Cagra.1671s0002 1.0kb downstream 1.0kb downstream 3370 true Scaffold1671: 1440-4809 Capsella grandiflora
Cagra.1671s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 1440-2439 Capsella grandiflora
Cagra.1671s0002 2.0kb upstream 2.0kb upstream 4370 true Scaffold1671: 2440-6809 Capsella grandiflora
Cagra.1671s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 4810-6809 Capsella grandiflora
Cagra.1671s0002 2.0kb downstream 2.0kb downstream 4370 true Scaffold1671: 440-4809 Capsella grandiflora
Cagra.1671s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 440-2439 Capsella grandiflora
Cagra.1671s0002 5.0kb upstream 5.0kb upstream 7370 true Scaffold1671: 2440-9809 Capsella grandiflora
Cagra.1671s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 4810-9809 Capsella grandiflora
Cagra.1671s0002 5.0kb downstream 5.0kb downstream 4809 true Scaffold1671: 1-4809 Capsella grandiflora
Cagra.1671s0002 5.0kb downstream 5.0kb downstream 2439 false Scaffold1671: 1-2439 Capsella grandiflora
Cagra.1671s0002 10.0kb upstream 10.0kb upstream 12370 true Scaffold1671: 2440-14809 Capsella grandiflora
Cagra.1671s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 4810-14809 Capsella grandiflora
Cagra.1671s0002 10.0kb downstream 10.0kb downstream 4809 true Scaffold1671: 1-4809 Capsella grandiflora
Cagra.1671s0002 10.0kb downstream 10.0kb downstream 2439 false Scaffold1671: 1-2439 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380060 5261 Brassicaceae View MSA
123802538 5264 Brassicales-Malvales View MSA
124299726 5266 SBM View MSA
124243726 5268 Malvidae View MSA
124065127 5270 Rosid View MSA
123749728 5271 Pentapetalae View MSA
122788534 5272 Eudicot View MSA
122042382 5273 Angiosperm View MSA
121346311 5274 Embryophyte View MSA
123424137 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain