Gene : Cagra.1671s0008 C. grandiflora v1.1
Defline:  (1 of 2) PTHR21737:SF4 - CACTIN Genomic Order:  8
Name:  ? Cagra.1671s0008 Secondary Identifier:  ? PAC:28914316
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0008 0.5kb upstream 0.5kb upstream 5167 true Scaffold1671: 19203-24369 Capsella grandiflora
Cagra.1671s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 19203-19702 Capsella grandiflora
Cagra.1671s0008 0.5kb downstream 0.5kb downstream 5167 true Scaffold1671: 19703-24869 Capsella grandiflora
Cagra.1671s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 24370-24869 Capsella grandiflora
Cagra.1671s0008 1.0kb upstream 1.0kb upstream 5667 true Scaffold1671: 18703-24369 Capsella grandiflora
Cagra.1671s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 18703-19702 Capsella grandiflora
Cagra.1671s0008 1.0kb downstream 1.0kb downstream 5667 true Scaffold1671: 19703-25369 Capsella grandiflora
Cagra.1671s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 24370-25369 Capsella grandiflora
Cagra.1671s0008 2.0kb upstream 2.0kb upstream 6667 true Scaffold1671: 17703-24369 Capsella grandiflora
Cagra.1671s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 17703-19702 Capsella grandiflora
Cagra.1671s0008 2.0kb downstream 2.0kb downstream 6667 true Scaffold1671: 19703-26369 Capsella grandiflora
Cagra.1671s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 24370-26369 Capsella grandiflora
Cagra.1671s0008 5.0kb upstream 5.0kb upstream 9667 true Scaffold1671: 14703-24369 Capsella grandiflora
Cagra.1671s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 14703-19702 Capsella grandiflora
Cagra.1671s0008 5.0kb downstream 5.0kb downstream 9667 true Scaffold1671: 19703-29369 Capsella grandiflora
Cagra.1671s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 24370-29369 Capsella grandiflora
Cagra.1671s0008 10.0kb upstream 10.0kb upstream 14667 true Scaffold1671: 9703-24369 Capsella grandiflora
Cagra.1671s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 9703-19702 Capsella grandiflora
Cagra.1671s0008 10.0kb downstream 10.0kb downstream 14667 true Scaffold1671: 19703-34369 Capsella grandiflora
Cagra.1671s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 24370-34369 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375946 5261 Brassicaceae View MSA
123834250 5264 Brassicales-Malvales View MSA
124343395 5266 SBM View MSA
124237818 5268 Malvidae View MSA
124062313 5270 Rosid View MSA
123746898 5271 Pentapetalae View MSA
122792655 5272 Eudicot View MSA
122043327 5273 Angiosperm View MSA
121346365 5274 Embryophyte View MSA
123428349 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain