Gene : Cagra.1914s0017 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10910//PTHR10910:SF109 - EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN Genomic Order:  17
Name:  ? Cagra.1914s0017 Secondary Identifier:  ? PAC:28901313
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1914s0017 0.5kb upstream 0.5kb upstream 1868 true Scaffold1914: 83020-84887 Capsella grandiflora
Cagra.1914s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold1914: 84388-84887 Capsella grandiflora
Cagra.1914s0017 0.5kb downstream 0.5kb downstream 1868 true Scaffold1914: 82520-84387 Capsella grandiflora
Cagra.1914s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold1914: 82520-83019 Capsella grandiflora
Cagra.1914s0017 1.0kb upstream 1.0kb upstream 2368 true Scaffold1914: 83020-85387 Capsella grandiflora
Cagra.1914s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold1914: 84388-85387 Capsella grandiflora
Cagra.1914s0017 1.0kb downstream 1.0kb downstream 2368 true Scaffold1914: 82020-84387 Capsella grandiflora
Cagra.1914s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold1914: 82020-83019 Capsella grandiflora
Cagra.1914s0017 2.0kb upstream 2.0kb upstream 3368 true Scaffold1914: 83020-86387 Capsella grandiflora
Cagra.1914s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold1914: 84388-86387 Capsella grandiflora
Cagra.1914s0017 2.0kb downstream 2.0kb downstream 3368 true Scaffold1914: 81020-84387 Capsella grandiflora
Cagra.1914s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold1914: 81020-83019 Capsella grandiflora
Cagra.1914s0017 5.0kb upstream 5.0kb upstream 6368 true Scaffold1914: 83020-89387 Capsella grandiflora
Cagra.1914s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold1914: 84388-89387 Capsella grandiflora
Cagra.1914s0017 5.0kb downstream 5.0kb downstream 6368 true Scaffold1914: 78020-84387 Capsella grandiflora
Cagra.1914s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold1914: 78020-83019 Capsella grandiflora
Cagra.1914s0017 10.0kb upstream 10.0kb upstream 11368 true Scaffold1914: 83020-94387 Capsella grandiflora
Cagra.1914s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold1914: 84388-94387 Capsella grandiflora
Cagra.1914s0017 10.0kb downstream 10.0kb downstream 11368 true Scaffold1914: 73020-84387 Capsella grandiflora
Cagra.1914s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold1914: 73020-83019 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121496262 5273 Angiosperm Singleton cluster - no MSA
122332962 5261 Brassicaceae Singleton cluster - no MSA
123773970 5264 Brassicales-Malvales Singleton cluster - no MSA
124272431 5266 SBM Singleton cluster - no MSA
124128253 5268 Malvidae Singleton cluster - no MSA
123856995 5270 Rosid Singleton cluster - no MSA
123442861 5271 Pentapetalae Singleton cluster - no MSA
122478432 5272 Eudicot Singleton cluster - no MSA
120769623 5274 Embryophyte Singleton cluster - no MSA
122811991 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain