Gene : Cagra.1917s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11991 - TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED Genomic Order:  2
Name:  ? Cagra.1917s0002 Secondary Identifier:  ? PAC:28906358
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1917s0002 0.5kb upstream 0.5kb upstream 2113 true Scaffold1917: 4996-7108 Capsella grandiflora
Cagra.1917s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold1917: 4996-5495 Capsella grandiflora
Cagra.1917s0002 0.5kb downstream 0.5kb downstream 2113 true Scaffold1917: 5496-7608 Capsella grandiflora
Cagra.1917s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold1917: 7109-7608 Capsella grandiflora
Cagra.1917s0002 1.0kb upstream 1.0kb upstream 2613 true Scaffold1917: 4496-7108 Capsella grandiflora
Cagra.1917s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold1917: 4496-5495 Capsella grandiflora
Cagra.1917s0002 1.0kb downstream 1.0kb downstream 2613 true Scaffold1917: 5496-8108 Capsella grandiflora
Cagra.1917s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold1917: 7109-8108 Capsella grandiflora
Cagra.1917s0002 2.0kb upstream 2.0kb upstream 3613 true Scaffold1917: 3496-7108 Capsella grandiflora
Cagra.1917s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold1917: 3496-5495 Capsella grandiflora
Cagra.1917s0002 2.0kb downstream 2.0kb downstream 3613 true Scaffold1917: 5496-9108 Capsella grandiflora
Cagra.1917s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold1917: 7109-9108 Capsella grandiflora
Cagra.1917s0002 5.0kb upstream 5.0kb upstream 6613 true Scaffold1917: 496-7108 Capsella grandiflora
Cagra.1917s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold1917: 496-5495 Capsella grandiflora
Cagra.1917s0002 5.0kb downstream 5.0kb downstream 6613 true Scaffold1917: 5496-12108 Capsella grandiflora
Cagra.1917s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold1917: 7109-12108 Capsella grandiflora
Cagra.1917s0002 10.0kb upstream 10.0kb upstream 7108 true Scaffold1917: 1-7108 Capsella grandiflora
Cagra.1917s0002 10.0kb upstream 10.0kb upstream 5495 false Scaffold1917: 1-5495 Capsella grandiflora
Cagra.1917s0002 10.0kb downstream 10.0kb downstream 11613 true Scaffold1917: 5496-17108 Capsella grandiflora
Cagra.1917s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold1917: 7109-17108 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377842 5261 Brassicaceae View MSA
123839856 5264 Brassicales-Malvales View MSA
124343288 5266 SBM View MSA
124239278 5268 Malvidae View MSA
124072412 5270 Rosid View MSA
123743771 5271 Pentapetalae View MSA
122796056 5272 Eudicot View MSA
122046002 5273 Angiosperm View MSA
121343936 5274 Embryophyte View MSA
123424738 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain