Gene : Cagra.1945s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR15341 - SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR Genomic Order:  4
Name:  ? Cagra.1945s0004 Secondary Identifier:  ? PAC:28901639
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1945s0004 0.5kb upstream 0.5kb upstream 2890 true Scaffold1945: 15532-18421 Capsella grandiflora
Cagra.1945s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1945: 15532-16031 Capsella grandiflora
Cagra.1945s0004 0.5kb downstream 0.5kb downstream 2890 true Scaffold1945: 16032-18921 Capsella grandiflora
Cagra.1945s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1945: 18422-18921 Capsella grandiflora
Cagra.1945s0004 1.0kb upstream 1.0kb upstream 3390 true Scaffold1945: 15032-18421 Capsella grandiflora
Cagra.1945s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1945: 15032-16031 Capsella grandiflora
Cagra.1945s0004 1.0kb downstream 1.0kb downstream 3390 true Scaffold1945: 16032-19421 Capsella grandiflora
Cagra.1945s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1945: 18422-19421 Capsella grandiflora
Cagra.1945s0004 2.0kb upstream 2.0kb upstream 4390 true Scaffold1945: 14032-18421 Capsella grandiflora
Cagra.1945s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1945: 14032-16031 Capsella grandiflora
Cagra.1945s0004 2.0kb downstream 2.0kb downstream 4390 true Scaffold1945: 16032-20421 Capsella grandiflora
Cagra.1945s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1945: 18422-20421 Capsella grandiflora
Cagra.1945s0004 5.0kb upstream 5.0kb upstream 7390 true Scaffold1945: 11032-18421 Capsella grandiflora
Cagra.1945s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1945: 11032-16031 Capsella grandiflora
Cagra.1945s0004 5.0kb downstream 5.0kb downstream 7390 true Scaffold1945: 16032-23421 Capsella grandiflora
Cagra.1945s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1945: 18422-23421 Capsella grandiflora
Cagra.1945s0004 10.0kb upstream 10.0kb upstream 12390 true Scaffold1945: 6032-18421 Capsella grandiflora
Cagra.1945s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1945: 6032-16031 Capsella grandiflora
Cagra.1945s0004 10.0kb downstream 10.0kb downstream 12390 true Scaffold1945: 16032-28421 Capsella grandiflora
Cagra.1945s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1945: 18422-28421 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373718 5261 Brassicaceae View MSA
123834179 5264 Brassicales-Malvales View MSA
124341939 5266 SBM View MSA
124240764 5268 Malvidae View MSA
124064707 5270 Rosid View MSA
123740076 5271 Pentapetalae View MSA
122793567 5272 Eudicot View MSA
122042099 5273 Angiosperm View MSA
121346088 5274 Embryophyte View MSA
123425407 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain