Gene : Cagra.1952s0005 C. grandiflora v1.1
Defline:  (1 of 71) PTHR32212:SF126 - EMB Genomic Order:  5
Name:  ? Cagra.1952s0005 Secondary Identifier:  ? PAC:28898243
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1952s0005 0.5kb upstream 0.5kb upstream 2099 true Scaffold1952: 15307-17405 Capsella grandiflora
Cagra.1952s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold1952: 16906-17405 Capsella grandiflora
Cagra.1952s0005 0.5kb downstream 0.5kb downstream 2099 true Scaffold1952: 14807-16905 Capsella grandiflora
Cagra.1952s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold1952: 14807-15306 Capsella grandiflora
Cagra.1952s0005 1.0kb upstream 1.0kb upstream 2599 true Scaffold1952: 15307-17905 Capsella grandiflora
Cagra.1952s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold1952: 16906-17905 Capsella grandiflora
Cagra.1952s0005 1.0kb downstream 1.0kb downstream 2599 true Scaffold1952: 14307-16905 Capsella grandiflora
Cagra.1952s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold1952: 14307-15306 Capsella grandiflora
Cagra.1952s0005 2.0kb upstream 2.0kb upstream 3599 true Scaffold1952: 15307-18905 Capsella grandiflora
Cagra.1952s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold1952: 16906-18905 Capsella grandiflora
Cagra.1952s0005 2.0kb downstream 2.0kb downstream 3599 true Scaffold1952: 13307-16905 Capsella grandiflora
Cagra.1952s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold1952: 13307-15306 Capsella grandiflora
Cagra.1952s0005 5.0kb upstream 5.0kb upstream 6599 true Scaffold1952: 15307-21905 Capsella grandiflora
Cagra.1952s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold1952: 16906-21905 Capsella grandiflora
Cagra.1952s0005 5.0kb downstream 5.0kb downstream 6599 true Scaffold1952: 10307-16905 Capsella grandiflora
Cagra.1952s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold1952: 10307-15306 Capsella grandiflora
Cagra.1952s0005 10.0kb upstream 10.0kb upstream 11599 true Scaffold1952: 15307-26905 Capsella grandiflora
Cagra.1952s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold1952: 16906-26905 Capsella grandiflora
Cagra.1952s0005 10.0kb downstream 10.0kb downstream 11599 true Scaffold1952: 5307-16905 Capsella grandiflora
Cagra.1952s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold1952: 5307-15306 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379638 5261 Brassicaceae View MSA
123802361 5264 Brassicales-Malvales View MSA
124299560 5266 SBM View MSA
124254039 5268 Malvidae View MSA
124073024 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain