Gene : Cagra.1952s0004 C. grandiflora v1.1
Defline:  (1 of 71) PTHR32212:SF126 - EMB Genomic Order:  4
Name:  ? Cagra.1952s0004 Secondary Identifier:  ? PAC:28898221
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1952s0004 0.5kb upstream 0.5kb upstream 1987 true Scaffold1952: 13009-14995 Capsella grandiflora
Cagra.1952s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1952: 14496-14995 Capsella grandiflora
Cagra.1952s0004 0.5kb downstream 0.5kb downstream 1987 true Scaffold1952: 12509-14495 Capsella grandiflora
Cagra.1952s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1952: 12509-13008 Capsella grandiflora
Cagra.1952s0004 1.0kb upstream 1.0kb upstream 2487 true Scaffold1952: 13009-15495 Capsella grandiflora
Cagra.1952s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1952: 14496-15495 Capsella grandiflora
Cagra.1952s0004 1.0kb downstream 1.0kb downstream 2487 true Scaffold1952: 12009-14495 Capsella grandiflora
Cagra.1952s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1952: 12009-13008 Capsella grandiflora
Cagra.1952s0004 2.0kb upstream 2.0kb upstream 3487 true Scaffold1952: 13009-16495 Capsella grandiflora
Cagra.1952s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1952: 14496-16495 Capsella grandiflora
Cagra.1952s0004 2.0kb downstream 2.0kb downstream 3487 true Scaffold1952: 11009-14495 Capsella grandiflora
Cagra.1952s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1952: 11009-13008 Capsella grandiflora
Cagra.1952s0004 5.0kb upstream 5.0kb upstream 6487 true Scaffold1952: 13009-19495 Capsella grandiflora
Cagra.1952s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1952: 14496-19495 Capsella grandiflora
Cagra.1952s0004 5.0kb downstream 5.0kb downstream 6487 true Scaffold1952: 8009-14495 Capsella grandiflora
Cagra.1952s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1952: 8009-13008 Capsella grandiflora
Cagra.1952s0004 10.0kb upstream 10.0kb upstream 11487 true Scaffold1952: 13009-24495 Capsella grandiflora
Cagra.1952s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1952: 14496-24495 Capsella grandiflora
Cagra.1952s0004 10.0kb downstream 10.0kb downstream 11487 true Scaffold1952: 3009-14495 Capsella grandiflora
Cagra.1952s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1952: 3009-13008 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122337720 5261 Brassicaceae View MSA
123778355 5264 Brassicales-Malvales View MSA
124276702 5266 SBM View MSA
124254039 5268 Malvidae View MSA
124073024 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain