Gene : Cagra.1952s0014 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31953:SF1 - BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV2-RELATED Genomic Order:  14
Name:  ? Cagra.1952s0014 Secondary Identifier:  ? PAC:28898244
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-621 Capsella grandiflora pathologic  
Cgrandiflora PWY66-373 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1952s0014 0.5kb upstream 0.5kb upstream 2845 true Scaffold1952: 38967-41811 Capsella grandiflora
Cagra.1952s0014 0.5kb upstream 0.5kb upstream 500 false Scaffold1952: 38967-39466 Capsella grandiflora
Cagra.1952s0014 0.5kb downstream 0.5kb downstream 2845 true Scaffold1952: 39467-42311 Capsella grandiflora
Cagra.1952s0014 0.5kb downstream 0.5kb downstream 500 false Scaffold1952: 41812-42311 Capsella grandiflora
Cagra.1952s0014 1.0kb upstream 1.0kb upstream 3345 true Scaffold1952: 38467-41811 Capsella grandiflora
Cagra.1952s0014 1.0kb upstream 1.0kb upstream 1000 false Scaffold1952: 38467-39466 Capsella grandiflora
Cagra.1952s0014 1.0kb downstream 1.0kb downstream 3345 true Scaffold1952: 39467-42811 Capsella grandiflora
Cagra.1952s0014 1.0kb downstream 1.0kb downstream 1000 false Scaffold1952: 41812-42811 Capsella grandiflora
Cagra.1952s0014 2.0kb upstream 2.0kb upstream 4345 true Scaffold1952: 37467-41811 Capsella grandiflora
Cagra.1952s0014 2.0kb upstream 2.0kb upstream 2000 false Scaffold1952: 37467-39466 Capsella grandiflora
Cagra.1952s0014 2.0kb downstream 2.0kb downstream 4345 true Scaffold1952: 39467-43811 Capsella grandiflora
Cagra.1952s0014 2.0kb downstream 2.0kb downstream 2000 false Scaffold1952: 41812-43811 Capsella grandiflora
Cagra.1952s0014 5.0kb upstream 5.0kb upstream 7345 true Scaffold1952: 34467-41811 Capsella grandiflora
Cagra.1952s0014 5.0kb upstream 5.0kb upstream 5000 false Scaffold1952: 34467-39466 Capsella grandiflora
Cagra.1952s0014 5.0kb downstream 5.0kb downstream 7345 true Scaffold1952: 39467-46811 Capsella grandiflora
Cagra.1952s0014 5.0kb downstream 5.0kb downstream 5000 false Scaffold1952: 41812-46811 Capsella grandiflora
Cagra.1952s0014 10.0kb upstream 10.0kb upstream 12345 true Scaffold1952: 29467-41811 Capsella grandiflora
Cagra.1952s0014 10.0kb upstream 10.0kb upstream 10000 false Scaffold1952: 29467-39466 Capsella grandiflora
Cagra.1952s0014 10.0kb downstream 10.0kb downstream 12345 true Scaffold1952: 39467-51811 Capsella grandiflora
Cagra.1952s0014 10.0kb downstream 10.0kb downstream 10000 false Scaffold1952: 41812-51811 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372737 5261 Brassicaceae View MSA
123836122 5264 Brassicales-Malvales View MSA
124342713 5266 SBM View MSA
124252063 5268 Malvidae View MSA
124060411 5270 Rosid View MSA
123752983 5271 Pentapetalae View MSA
122793631 5272 Eudicot View MSA
122047232 5273 Angiosperm View MSA
121350675 5274 Embryophyte View MSA
123428659 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain