Gene : Cagra.1952s0027 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11638//PTHR11638:SF69 - ATP-DEPENDENT CLP PROTEASE Genomic Order:  27
Name:  ? Cagra.1952s0027 Secondary Identifier:  ? PAC:28898222
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1952s0027 0.5kb upstream 0.5kb upstream 3710 true Scaffold1952: 89384-93093 Capsella grandiflora
Cagra.1952s0027 0.5kb upstream 0.5kb upstream 500 false Scaffold1952: 89384-89883 Capsella grandiflora
Cagra.1952s0027 0.5kb downstream 0.5kb downstream 3710 true Scaffold1952: 89884-93593 Capsella grandiflora
Cagra.1952s0027 0.5kb downstream 0.5kb downstream 500 false Scaffold1952: 93094-93593 Capsella grandiflora
Cagra.1952s0027 1.0kb upstream 1.0kb upstream 4210 true Scaffold1952: 88884-93093 Capsella grandiflora
Cagra.1952s0027 1.0kb upstream 1.0kb upstream 1000 false Scaffold1952: 88884-89883 Capsella grandiflora
Cagra.1952s0027 1.0kb downstream 1.0kb downstream 4210 true Scaffold1952: 89884-94093 Capsella grandiflora
Cagra.1952s0027 1.0kb downstream 1.0kb downstream 1000 false Scaffold1952: 93094-94093 Capsella grandiflora
Cagra.1952s0027 2.0kb upstream 2.0kb upstream 5210 true Scaffold1952: 87884-93093 Capsella grandiflora
Cagra.1952s0027 2.0kb upstream 2.0kb upstream 2000 false Scaffold1952: 87884-89883 Capsella grandiflora
Cagra.1952s0027 2.0kb downstream 2.0kb downstream 5210 true Scaffold1952: 89884-95093 Capsella grandiflora
Cagra.1952s0027 2.0kb downstream 2.0kb downstream 2000 false Scaffold1952: 93094-95093 Capsella grandiflora
Cagra.1952s0027 5.0kb upstream 5.0kb upstream 8210 true Scaffold1952: 84884-93093 Capsella grandiflora
Cagra.1952s0027 5.0kb upstream 5.0kb upstream 5000 false Scaffold1952: 84884-89883 Capsella grandiflora
Cagra.1952s0027 5.0kb downstream 5.0kb downstream 8210 true Scaffold1952: 89884-98093 Capsella grandiflora
Cagra.1952s0027 5.0kb downstream 5.0kb downstream 5000 false Scaffold1952: 93094-98093 Capsella grandiflora
Cagra.1952s0027 10.0kb upstream 10.0kb upstream 13210 true Scaffold1952: 79884-93093 Capsella grandiflora
Cagra.1952s0027 10.0kb upstream 10.0kb upstream 10000 false Scaffold1952: 79884-89883 Capsella grandiflora
Cagra.1952s0027 10.0kb downstream 10.0kb downstream 13210 true Scaffold1952: 89884-103093 Capsella grandiflora
Cagra.1952s0027 10.0kb downstream 10.0kb downstream 10000 false Scaffold1952: 93094-103093 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367447 5261 Brassicaceae View MSA
123833946 5264 Brassicales-Malvales View MSA
124337005 5266 SBM View MSA
124244342 5268 Malvidae View MSA
124070007 5270 Rosid View MSA
123743418 5271 Pentapetalae View MSA
122787302 5272 Eudicot View MSA
122049419 5273 Angiosperm View MSA
121351273 5274 Embryophyte View MSA
123382090 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain