Gene : Cagra.1953s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12277:SF58 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN Genomic Order:  5
Name:  ? Cagra.1953s0005 Secondary Identifier:  ? PAC:28913688
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1953s0005 0.5kb upstream 0.5kb upstream 5372 true Scaffold1953: 19368-24739 Capsella grandiflora
Cagra.1953s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold1953: 19368-19867 Capsella grandiflora
Cagra.1953s0005 0.5kb downstream 0.5kb downstream 5372 true Scaffold1953: 19868-25239 Capsella grandiflora
Cagra.1953s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold1953: 24740-25239 Capsella grandiflora
Cagra.1953s0005 1.0kb upstream 1.0kb upstream 5872 true Scaffold1953: 18868-24739 Capsella grandiflora
Cagra.1953s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold1953: 18868-19867 Capsella grandiflora
Cagra.1953s0005 1.0kb downstream 1.0kb downstream 5872 true Scaffold1953: 19868-25739 Capsella grandiflora
Cagra.1953s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold1953: 24740-25739 Capsella grandiflora
Cagra.1953s0005 2.0kb upstream 2.0kb upstream 6872 true Scaffold1953: 17868-24739 Capsella grandiflora
Cagra.1953s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold1953: 17868-19867 Capsella grandiflora
Cagra.1953s0005 2.0kb downstream 2.0kb downstream 6872 true Scaffold1953: 19868-26739 Capsella grandiflora
Cagra.1953s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold1953: 24740-26739 Capsella grandiflora
Cagra.1953s0005 5.0kb upstream 5.0kb upstream 9872 true Scaffold1953: 14868-24739 Capsella grandiflora
Cagra.1953s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold1953: 14868-19867 Capsella grandiflora
Cagra.1953s0005 5.0kb downstream 5.0kb downstream 9872 true Scaffold1953: 19868-29739 Capsella grandiflora
Cagra.1953s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold1953: 24740-29739 Capsella grandiflora
Cagra.1953s0005 10.0kb upstream 10.0kb upstream 14872 true Scaffold1953: 9868-24739 Capsella grandiflora
Cagra.1953s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold1953: 9868-19867 Capsella grandiflora
Cagra.1953s0005 10.0kb downstream 10.0kb downstream 10590 true Scaffold1953: 19868-30457 Capsella grandiflora
Cagra.1953s0005 10.0kb downstream 10.0kb downstream 5718 false Scaffold1953: 24740-30457 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367635 5261 Brassicaceae View MSA
123837635 5264 Brassicales-Malvales View MSA
124339881 5266 SBM View MSA
124239585 5268 Malvidae View MSA
124064607 5270 Rosid View MSA
123753739 5271 Pentapetalae View MSA
122791791 5272 Eudicot View MSA
122047952 5273 Angiosperm View MSA
121347410 5274 Embryophyte View MSA
123427961 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain