Gene : Cagra.1889s0006 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31561:SF21 - 3-KETOACYL-COA SYNTHASE 15 Genomic Order:  6
Name:  ? Cagra.1889s0006 Secondary Identifier:  ? PAC:28908585
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5080 Capsella grandiflora pathologic  
Cgrandiflora PWY-6433 Capsella grandiflora pathologic  
Cgrandiflora PWY-6598 Capsella grandiflora pathologic  
Cgrandiflora PWY-7036 Capsella grandiflora pathologic  
Cgrandiflora PWY-7601 Capsella grandiflora pathologic  
Cgrandiflora PWY-7619 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1889s0006 0.5kb upstream 0.5kb upstream 2038 true Scaffold1889: 19322-21359 Capsella grandiflora
Cagra.1889s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold1889: 20860-21359 Capsella grandiflora
Cagra.1889s0006 0.5kb downstream 0.5kb downstream 2038 true Scaffold1889: 18822-20859 Capsella grandiflora
Cagra.1889s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold1889: 18822-19321 Capsella grandiflora
Cagra.1889s0006 1.0kb upstream 1.0kb upstream 2538 true Scaffold1889: 19322-21859 Capsella grandiflora
Cagra.1889s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold1889: 20860-21859 Capsella grandiflora
Cagra.1889s0006 1.0kb downstream 1.0kb downstream 2538 true Scaffold1889: 18322-20859 Capsella grandiflora
Cagra.1889s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold1889: 18322-19321 Capsella grandiflora
Cagra.1889s0006 2.0kb upstream 2.0kb upstream 3538 true Scaffold1889: 19322-22859 Capsella grandiflora
Cagra.1889s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold1889: 20860-22859 Capsella grandiflora
Cagra.1889s0006 2.0kb downstream 2.0kb downstream 3538 true Scaffold1889: 17322-20859 Capsella grandiflora
Cagra.1889s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold1889: 17322-19321 Capsella grandiflora
Cagra.1889s0006 5.0kb upstream 5.0kb upstream 6538 true Scaffold1889: 19322-25859 Capsella grandiflora
Cagra.1889s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold1889: 20860-25859 Capsella grandiflora
Cagra.1889s0006 5.0kb downstream 5.0kb downstream 6538 true Scaffold1889: 14322-20859 Capsella grandiflora
Cagra.1889s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold1889: 14322-19321 Capsella grandiflora
Cagra.1889s0006 10.0kb upstream 10.0kb upstream 11538 true Scaffold1889: 19322-30859 Capsella grandiflora
Cagra.1889s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold1889: 20860-30859 Capsella grandiflora
Cagra.1889s0006 10.0kb downstream 10.0kb downstream 11538 true Scaffold1889: 9322-20859 Capsella grandiflora
Cagra.1889s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold1889: 9322-19321 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791805 5273 Angiosperm View MSA
122361755 5261 Brassicaceae View MSA
123798240 5264 Brassicales-Malvales View MSA
124295908 5266 SBM View MSA
124148215 5268 Malvidae View MSA
124070288 5270 Rosid View MSA
123742604 5271 Pentapetalae View MSA
122793984 5272 Eudicot View MSA
121063095 5274 Embryophyte View MSA
123102879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain