Gene : Cagra.1889s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23029:SF49 - PHOSPHOHISTIDINE PHOSPHATASE SIXA Genomic Order:  5
Name:  ? Cagra.1889s0005 Secondary Identifier:  ? PAC:28908586
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1889s0005 0.5kb upstream 0.5kb upstream 2127 true Scaffold1889: 17141-19267 Capsella grandiflora
Cagra.1889s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold1889: 17141-17640 Capsella grandiflora
Cagra.1889s0005 0.5kb downstream 0.5kb downstream 2127 true Scaffold1889: 17641-19767 Capsella grandiflora
Cagra.1889s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold1889: 19268-19767 Capsella grandiflora
Cagra.1889s0005 1.0kb upstream 1.0kb upstream 2627 true Scaffold1889: 16641-19267 Capsella grandiflora
Cagra.1889s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold1889: 16641-17640 Capsella grandiflora
Cagra.1889s0005 1.0kb downstream 1.0kb downstream 2627 true Scaffold1889: 17641-20267 Capsella grandiflora
Cagra.1889s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold1889: 19268-20267 Capsella grandiflora
Cagra.1889s0005 2.0kb upstream 2.0kb upstream 3627 true Scaffold1889: 15641-19267 Capsella grandiflora
Cagra.1889s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold1889: 15641-17640 Capsella grandiflora
Cagra.1889s0005 2.0kb downstream 2.0kb downstream 3627 true Scaffold1889: 17641-21267 Capsella grandiflora
Cagra.1889s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold1889: 19268-21267 Capsella grandiflora
Cagra.1889s0005 5.0kb upstream 5.0kb upstream 6627 true Scaffold1889: 12641-19267 Capsella grandiflora
Cagra.1889s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold1889: 12641-17640 Capsella grandiflora
Cagra.1889s0005 5.0kb downstream 5.0kb downstream 6627 true Scaffold1889: 17641-24267 Capsella grandiflora
Cagra.1889s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold1889: 19268-24267 Capsella grandiflora
Cagra.1889s0005 10.0kb upstream 10.0kb upstream 11627 true Scaffold1889: 7641-19267 Capsella grandiflora
Cagra.1889s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold1889: 7641-17640 Capsella grandiflora
Cagra.1889s0005 10.0kb downstream 10.0kb downstream 11627 true Scaffold1889: 17641-29267 Capsella grandiflora
Cagra.1889s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold1889: 19268-29267 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363259 5261 Brassicaceae View MSA
123836022 5264 Brassicales-Malvales View MSA
124342839 5266 SBM View MSA
124249090 5268 Malvidae View MSA
124072550 5270 Rosid View MSA
123737529 5271 Pentapetalae View MSA
122792609 5272 Eudicot View MSA
122043968 5273 Angiosperm View MSA
121345755 5274 Embryophyte View MSA
123426620 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain