Gene : Cagra.1889s0010 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23151:SF56 - DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT 1 OF PYRUVATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL Genomic Order:  10
Name:  ? Cagra.1889s0010 Secondary Identifier:  ? PAC:28908594
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5173 Capsella grandiflora pathologic  
Cgrandiflora PWY-5464 Capsella grandiflora pathologic  
Cgrandiflora PYRUVDEHYD-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1889s0010 0.5kb upstream 0.5kb upstream 7326 true Scaffold1889: 33709-41034 Capsella grandiflora
Cagra.1889s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold1889: 33709-34208 Capsella grandiflora
Cagra.1889s0010 0.5kb downstream 0.5kb downstream 7326 true Scaffold1889: 34209-41534 Capsella grandiflora
Cagra.1889s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold1889: 41035-41534 Capsella grandiflora
Cagra.1889s0010 1.0kb upstream 1.0kb upstream 7826 true Scaffold1889: 33209-41034 Capsella grandiflora
Cagra.1889s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold1889: 33209-34208 Capsella grandiflora
Cagra.1889s0010 1.0kb downstream 1.0kb downstream 7826 true Scaffold1889: 34209-42034 Capsella grandiflora
Cagra.1889s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold1889: 41035-42034 Capsella grandiflora
Cagra.1889s0010 2.0kb upstream 2.0kb upstream 8826 true Scaffold1889: 32209-41034 Capsella grandiflora
Cagra.1889s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold1889: 32209-34208 Capsella grandiflora
Cagra.1889s0010 2.0kb downstream 2.0kb downstream 8826 true Scaffold1889: 34209-43034 Capsella grandiflora
Cagra.1889s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold1889: 41035-43034 Capsella grandiflora
Cagra.1889s0010 5.0kb upstream 5.0kb upstream 11826 true Scaffold1889: 29209-41034 Capsella grandiflora
Cagra.1889s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold1889: 29209-34208 Capsella grandiflora
Cagra.1889s0010 5.0kb downstream 5.0kb downstream 11826 true Scaffold1889: 34209-46034 Capsella grandiflora
Cagra.1889s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold1889: 41035-46034 Capsella grandiflora
Cagra.1889s0010 10.0kb upstream 10.0kb upstream 16826 true Scaffold1889: 24209-41034 Capsella grandiflora
Cagra.1889s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold1889: 24209-34208 Capsella grandiflora
Cagra.1889s0010 10.0kb downstream 10.0kb downstream 16826 true Scaffold1889: 34209-51034 Capsella grandiflora
Cagra.1889s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold1889: 41035-51034 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040991 5273 Angiosperm View MSA
122368166 5261 Brassicaceae View MSA
123836955 5264 Brassicales-Malvales View MSA
124341796 5266 SBM View MSA
124242704 5268 Malvidae View MSA
124066791 5270 Rosid View MSA
123740075 5271 Pentapetalae View MSA
122787937 5272 Eudicot View MSA
121346587 5274 Embryophyte View MSA
123426306 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain