Gene : Cagra.1889s0020 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12700:SF12 - ATP SYNTHASE SUBUNIT D, MITOCHONDRIAL Genomic Order:  20
Name:  ? Cagra.1889s0020 Secondary Identifier:  ? PAC:28908583
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1889s0020 0.5kb upstream 0.5kb upstream 2356 true Scaffold1889: 70548-72903 Capsella grandiflora
Cagra.1889s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold1889: 70548-71047 Capsella grandiflora
Cagra.1889s0020 0.5kb downstream 0.5kb downstream 2356 true Scaffold1889: 71048-73403 Capsella grandiflora
Cagra.1889s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold1889: 72904-73403 Capsella grandiflora
Cagra.1889s0020 1.0kb upstream 1.0kb upstream 2856 true Scaffold1889: 70048-72903 Capsella grandiflora
Cagra.1889s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold1889: 70048-71047 Capsella grandiflora
Cagra.1889s0020 1.0kb downstream 1.0kb downstream 2856 true Scaffold1889: 71048-73903 Capsella grandiflora
Cagra.1889s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold1889: 72904-73903 Capsella grandiflora
Cagra.1889s0020 2.0kb upstream 2.0kb upstream 3856 true Scaffold1889: 69048-72903 Capsella grandiflora
Cagra.1889s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold1889: 69048-71047 Capsella grandiflora
Cagra.1889s0020 2.0kb downstream 2.0kb downstream 3856 true Scaffold1889: 71048-74903 Capsella grandiflora
Cagra.1889s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold1889: 72904-74903 Capsella grandiflora
Cagra.1889s0020 5.0kb upstream 5.0kb upstream 6856 true Scaffold1889: 66048-72903 Capsella grandiflora
Cagra.1889s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold1889: 66048-71047 Capsella grandiflora
Cagra.1889s0020 5.0kb downstream 5.0kb downstream 6856 true Scaffold1889: 71048-77903 Capsella grandiflora
Cagra.1889s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold1889: 72904-77903 Capsella grandiflora
Cagra.1889s0020 10.0kb upstream 10.0kb upstream 11856 true Scaffold1889: 61048-72903 Capsella grandiflora
Cagra.1889s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold1889: 61048-71047 Capsella grandiflora
Cagra.1889s0020 10.0kb downstream 10.0kb downstream 11856 true Scaffold1889: 71048-82903 Capsella grandiflora
Cagra.1889s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold1889: 72904-82903 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376464 5261 Brassicaceae View MSA
123836468 5264 Brassicales-Malvales View MSA
124342570 5266 SBM View MSA
124252287 5268 Malvidae View MSA
124061546 5270 Rosid View MSA
123743744 5271 Pentapetalae View MSA
122791088 5272 Eudicot View MSA
122044674 5273 Angiosperm View MSA
121348780 5274 Embryophyte View MSA
123427707 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain