Gene : Cagra.1891s0005 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31942:SF18 - MLO-LIKE PROTEIN 10-RELATED Genomic Order:  5
Name:  ? Cagra.1891s0005 Secondary Identifier:  ? PAC:28900493
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1891s0005 0.5kb upstream 0.5kb upstream 3369 true Scaffold1891: 19738-23106 Capsella grandiflora
Cagra.1891s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold1891: 22607-23106 Capsella grandiflora
Cagra.1891s0005 0.5kb downstream 0.5kb downstream 3369 true Scaffold1891: 19238-22606 Capsella grandiflora
Cagra.1891s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold1891: 19238-19737 Capsella grandiflora
Cagra.1891s0005 1.0kb upstream 1.0kb upstream 3869 true Scaffold1891: 19738-23606 Capsella grandiflora
Cagra.1891s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold1891: 22607-23606 Capsella grandiflora
Cagra.1891s0005 1.0kb downstream 1.0kb downstream 3869 true Scaffold1891: 18738-22606 Capsella grandiflora
Cagra.1891s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold1891: 18738-19737 Capsella grandiflora
Cagra.1891s0005 2.0kb upstream 2.0kb upstream 4869 true Scaffold1891: 19738-24606 Capsella grandiflora
Cagra.1891s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold1891: 22607-24606 Capsella grandiflora
Cagra.1891s0005 2.0kb downstream 2.0kb downstream 4869 true Scaffold1891: 17738-22606 Capsella grandiflora
Cagra.1891s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold1891: 17738-19737 Capsella grandiflora
Cagra.1891s0005 5.0kb upstream 5.0kb upstream 7869 true Scaffold1891: 19738-27606 Capsella grandiflora
Cagra.1891s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold1891: 22607-27606 Capsella grandiflora
Cagra.1891s0005 5.0kb downstream 5.0kb downstream 7869 true Scaffold1891: 14738-22606 Capsella grandiflora
Cagra.1891s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold1891: 14738-19737 Capsella grandiflora
Cagra.1891s0005 10.0kb upstream 10.0kb upstream 12869 true Scaffold1891: 19738-32606 Capsella grandiflora
Cagra.1891s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold1891: 22607-32606 Capsella grandiflora
Cagra.1891s0005 10.0kb downstream 10.0kb downstream 12869 true Scaffold1891: 9738-22606 Capsella grandiflora
Cagra.1891s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold1891: 9738-19737 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371142 5261 Brassicaceae View MSA
123838745 5264 Brassicales-Malvales View MSA
124345933 5266 SBM View MSA
124242080 5268 Malvidae View MSA
124063446 5270 Rosid View MSA
123751261 5271 Pentapetalae View MSA
122792831 5272 Eudicot View MSA
122047859 5273 Angiosperm View MSA
121350481 5274 Embryophyte View MSA
123428182 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain