Gene : Cagra.1912s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10015:SF169 - HEAT STRESS TRANSCRIPTION FACTOR B-2B Genomic Order:  5
Name:  ? Cagra.1912s0005 Secondary Identifier:  ? PAC:28897813
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1912s0005 0.5kb upstream 0.5kb upstream 2101 true Scaffold1912: 11285-13385 Capsella grandiflora
Cagra.1912s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold1912: 11285-11784 Capsella grandiflora
Cagra.1912s0005 0.5kb downstream 0.5kb downstream 2101 true Scaffold1912: 11785-13885 Capsella grandiflora
Cagra.1912s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold1912: 13386-13885 Capsella grandiflora
Cagra.1912s0005 1.0kb upstream 1.0kb upstream 2601 true Scaffold1912: 10785-13385 Capsella grandiflora
Cagra.1912s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold1912: 10785-11784 Capsella grandiflora
Cagra.1912s0005 1.0kb downstream 1.0kb downstream 2601 true Scaffold1912: 11785-14385 Capsella grandiflora
Cagra.1912s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold1912: 13386-14385 Capsella grandiflora
Cagra.1912s0005 2.0kb upstream 2.0kb upstream 3601 true Scaffold1912: 9785-13385 Capsella grandiflora
Cagra.1912s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold1912: 9785-11784 Capsella grandiflora
Cagra.1912s0005 2.0kb downstream 2.0kb downstream 3601 true Scaffold1912: 11785-15385 Capsella grandiflora
Cagra.1912s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold1912: 13386-15385 Capsella grandiflora
Cagra.1912s0005 5.0kb upstream 5.0kb upstream 6601 true Scaffold1912: 6785-13385 Capsella grandiflora
Cagra.1912s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold1912: 6785-11784 Capsella grandiflora
Cagra.1912s0005 5.0kb downstream 5.0kb downstream 6601 true Scaffold1912: 11785-18385 Capsella grandiflora
Cagra.1912s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold1912: 13386-18385 Capsella grandiflora
Cagra.1912s0005 10.0kb upstream 10.0kb upstream 11601 true Scaffold1912: 1785-13385 Capsella grandiflora
Cagra.1912s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold1912: 1785-11784 Capsella grandiflora
Cagra.1912s0005 10.0kb downstream 10.0kb downstream 11601 true Scaffold1912: 11785-23385 Capsella grandiflora
Cagra.1912s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold1912: 13386-23385 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373232 5261 Brassicaceae View MSA
123832596 5264 Brassicales-Malvales View MSA
124342086 5266 SBM View MSA
124242310 5268 Malvidae View MSA
124066248 5270 Rosid View MSA
123750823 5271 Pentapetalae View MSA
122797389 5272 Eudicot View MSA
122047819 5273 Angiosperm View MSA
121349623 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain