Gene : Cagra.1905s0011 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12555//PTHR12555:SF14 - UBIQUITIN FUSION DEGRADATON PROTEIN 1 Genomic Order:  11
Name:  ? Cagra.1905s0011 Secondary Identifier:  ? PAC:28912125
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1905s0011 0.5kb upstream 0.5kb upstream 2846 true Scaffold1905: 38910-41755 Capsella grandiflora
Cagra.1905s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold1905: 41256-41755 Capsella grandiflora
Cagra.1905s0011 0.5kb downstream 0.5kb downstream 2846 true Scaffold1905: 38410-41255 Capsella grandiflora
Cagra.1905s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold1905: 38410-38909 Capsella grandiflora
Cagra.1905s0011 1.0kb upstream 1.0kb upstream 3346 true Scaffold1905: 38910-42255 Capsella grandiflora
Cagra.1905s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold1905: 41256-42255 Capsella grandiflora
Cagra.1905s0011 1.0kb downstream 1.0kb downstream 3346 true Scaffold1905: 37910-41255 Capsella grandiflora
Cagra.1905s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold1905: 37910-38909 Capsella grandiflora
Cagra.1905s0011 2.0kb upstream 2.0kb upstream 4346 true Scaffold1905: 38910-43255 Capsella grandiflora
Cagra.1905s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold1905: 41256-43255 Capsella grandiflora
Cagra.1905s0011 2.0kb downstream 2.0kb downstream 4346 true Scaffold1905: 36910-41255 Capsella grandiflora
Cagra.1905s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold1905: 36910-38909 Capsella grandiflora
Cagra.1905s0011 5.0kb upstream 5.0kb upstream 5668 true Scaffold1905: 38910-44577 Capsella grandiflora
Cagra.1905s0011 5.0kb upstream 5.0kb upstream 3322 false Scaffold1905: 41256-44577 Capsella grandiflora
Cagra.1905s0011 5.0kb downstream 5.0kb downstream 7346 true Scaffold1905: 33910-41255 Capsella grandiflora
Cagra.1905s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold1905: 33910-38909 Capsella grandiflora
Cagra.1905s0011 10.0kb upstream 10.0kb upstream 5668 true Scaffold1905: 38910-44577 Capsella grandiflora
Cagra.1905s0011 10.0kb upstream 10.0kb upstream 3322 false Scaffold1905: 41256-44577 Capsella grandiflora
Cagra.1905s0011 10.0kb downstream 10.0kb downstream 12346 true Scaffold1905: 28910-41255 Capsella grandiflora
Cagra.1905s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold1905: 28910-38909 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371318 5261 Brassicaceae View MSA
123834790 5264 Brassicales-Malvales View MSA
124342726 5266 SBM View MSA
124239941 5268 Malvidae View MSA
124065261 5270 Rosid View MSA
123736611 5271 Pentapetalae View MSA
122787635 5272 Eudicot View MSA
122046586 5273 Angiosperm View MSA
121347183 5274 Embryophyte View MSA
123428055 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain