Gene : Cagra.1912s0013 C. grandiflora v1.1
Defline:  (1 of 1) PF00789//PF02809//PF14555 - UBX domain (UBX) // Ubiquitin interaction motif (UIM) // UBA-like domain (UBA_4) Genomic Order:  13
Name:  ? Cagra.1912s0013 Secondary Identifier:  ? PAC:28897823
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1912s0013 0.5kb upstream 0.5kb upstream 4350 true Scaffold1912: 45170-49519 Capsella grandiflora
Cagra.1912s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold1912: 45170-45669 Capsella grandiflora
Cagra.1912s0013 0.5kb downstream 0.5kb downstream 4350 true Scaffold1912: 45670-50019 Capsella grandiflora
Cagra.1912s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold1912: 49520-50019 Capsella grandiflora
Cagra.1912s0013 1.0kb upstream 1.0kb upstream 4850 true Scaffold1912: 44670-49519 Capsella grandiflora
Cagra.1912s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold1912: 44670-45669 Capsella grandiflora
Cagra.1912s0013 1.0kb downstream 1.0kb downstream 4850 true Scaffold1912: 45670-50519 Capsella grandiflora
Cagra.1912s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold1912: 49520-50519 Capsella grandiflora
Cagra.1912s0013 2.0kb upstream 2.0kb upstream 5850 true Scaffold1912: 43670-49519 Capsella grandiflora
Cagra.1912s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold1912: 43670-45669 Capsella grandiflora
Cagra.1912s0013 2.0kb downstream 2.0kb downstream 5850 true Scaffold1912: 45670-51519 Capsella grandiflora
Cagra.1912s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold1912: 49520-51519 Capsella grandiflora
Cagra.1912s0013 5.0kb upstream 5.0kb upstream 8850 true Scaffold1912: 40670-49519 Capsella grandiflora
Cagra.1912s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold1912: 40670-45669 Capsella grandiflora
Cagra.1912s0013 5.0kb downstream 5.0kb downstream 8850 true Scaffold1912: 45670-54519 Capsella grandiflora
Cagra.1912s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold1912: 49520-54519 Capsella grandiflora
Cagra.1912s0013 10.0kb upstream 10.0kb upstream 13850 true Scaffold1912: 35670-49519 Capsella grandiflora
Cagra.1912s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold1912: 35670-45669 Capsella grandiflora
Cagra.1912s0013 10.0kb downstream 10.0kb downstream 11330 true Scaffold1912: 45670-56999 Capsella grandiflora
Cagra.1912s0013 10.0kb downstream 10.0kb downstream 7480 false Scaffold1912: 49520-56999 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366224 5261 Brassicaceae View MSA
123837595 5264 Brassicales-Malvales View MSA
124337673 5266 SBM View MSA
124240759 5268 Malvidae View MSA
124064254 5270 Rosid View MSA
123737041 5271 Pentapetalae View MSA
122785711 5272 Eudicot View MSA
122043295 5273 Angiosperm View MSA
121350840 5274 Embryophyte View MSA
123428055 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain