Gene : Cagra.1841s0007 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24322:SF547 - ALCOHOL DEHYDROGENASE-LIKE PROTEIN Genomic Order:  7
Name:  ? Cagra.1841s0007 Secondary Identifier:  ? PAC:28901929
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-695 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1841s0007 0.5kb upstream 0.5kb upstream 2273 true Scaffold1841: 44202-46474 Capsella grandiflora
Cagra.1841s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold1841: 45975-46474 Capsella grandiflora
Cagra.1841s0007 0.5kb downstream 0.5kb downstream 2273 true Scaffold1841: 43702-45974 Capsella grandiflora
Cagra.1841s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold1841: 43702-44201 Capsella grandiflora
Cagra.1841s0007 1.0kb upstream 1.0kb upstream 2773 true Scaffold1841: 44202-46974 Capsella grandiflora
Cagra.1841s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold1841: 45975-46974 Capsella grandiflora
Cagra.1841s0007 1.0kb downstream 1.0kb downstream 2773 true Scaffold1841: 43202-45974 Capsella grandiflora
Cagra.1841s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold1841: 43202-44201 Capsella grandiflora
Cagra.1841s0007 2.0kb upstream 2.0kb upstream 3773 true Scaffold1841: 44202-47974 Capsella grandiflora
Cagra.1841s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold1841: 45975-47974 Capsella grandiflora
Cagra.1841s0007 2.0kb downstream 2.0kb downstream 3773 true Scaffold1841: 42202-45974 Capsella grandiflora
Cagra.1841s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold1841: 42202-44201 Capsella grandiflora
Cagra.1841s0007 5.0kb upstream 5.0kb upstream 6773 true Scaffold1841: 44202-50974 Capsella grandiflora
Cagra.1841s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold1841: 45975-50974 Capsella grandiflora
Cagra.1841s0007 5.0kb downstream 5.0kb downstream 6773 true Scaffold1841: 39202-45974 Capsella grandiflora
Cagra.1841s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold1841: 39202-44201 Capsella grandiflora
Cagra.1841s0007 10.0kb upstream 10.0kb upstream 7330 true Scaffold1841: 44202-51531 Capsella grandiflora
Cagra.1841s0007 10.0kb upstream 10.0kb upstream 5557 false Scaffold1841: 45975-51531 Capsella grandiflora
Cagra.1841s0007 10.0kb downstream 10.0kb downstream 11773 true Scaffold1841: 34202-45974 Capsella grandiflora
Cagra.1841s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold1841: 34202-44201 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369144 5261 Brassicaceae View MSA
123828735 5264 Brassicales-Malvales View MSA
124345380 5266 SBM View MSA
124247805 5268 Malvidae View MSA
124068499 5270 Rosid View MSA
123741629 5271 Pentapetalae View MSA
122790439 5272 Eudicot View MSA
122042361 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain