Gene : Cagra.1850s0008 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11599:SF13 - PROTEASOME SUBUNIT ALPHA TYPE-4 Genomic Order:  8
Name:  ? Cagra.1850s0008 Secondary Identifier:  ? PAC:28896471
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1850s0008 0.5kb upstream 0.5kb upstream 2265 true Scaffold1850: 39965-42229 Capsella grandiflora
Cagra.1850s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold1850: 41730-42229 Capsella grandiflora
Cagra.1850s0008 0.5kb downstream 0.5kb downstream 2265 true Scaffold1850: 39465-41729 Capsella grandiflora
Cagra.1850s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold1850: 39465-39964 Capsella grandiflora
Cagra.1850s0008 1.0kb upstream 1.0kb upstream 2765 true Scaffold1850: 39965-42729 Capsella grandiflora
Cagra.1850s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold1850: 41730-42729 Capsella grandiflora
Cagra.1850s0008 1.0kb downstream 1.0kb downstream 2765 true Scaffold1850: 38965-41729 Capsella grandiflora
Cagra.1850s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold1850: 38965-39964 Capsella grandiflora
Cagra.1850s0008 2.0kb upstream 2.0kb upstream 3765 true Scaffold1850: 39965-43729 Capsella grandiflora
Cagra.1850s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold1850: 41730-43729 Capsella grandiflora
Cagra.1850s0008 2.0kb downstream 2.0kb downstream 3765 true Scaffold1850: 37965-41729 Capsella grandiflora
Cagra.1850s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold1850: 37965-39964 Capsella grandiflora
Cagra.1850s0008 5.0kb upstream 5.0kb upstream 6765 true Scaffold1850: 39965-46729 Capsella grandiflora
Cagra.1850s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold1850: 41730-46729 Capsella grandiflora
Cagra.1850s0008 5.0kb downstream 5.0kb downstream 6765 true Scaffold1850: 34965-41729 Capsella grandiflora
Cagra.1850s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold1850: 34965-39964 Capsella grandiflora
Cagra.1850s0008 10.0kb upstream 10.0kb upstream 11765 true Scaffold1850: 39965-51729 Capsella grandiflora
Cagra.1850s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold1850: 41730-51729 Capsella grandiflora
Cagra.1850s0008 10.0kb downstream 10.0kb downstream 11765 true Scaffold1850: 29965-41729 Capsella grandiflora
Cagra.1850s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold1850: 29965-39964 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378710 5261 Brassicaceae View MSA
123836342 5264 Brassicales-Malvales View MSA
124339595 5266 SBM View MSA
124237536 5268 Malvidae View MSA
124065392 5270 Rosid View MSA
123752544 5271 Pentapetalae View MSA
122786754 5272 Eudicot View MSA
122049144 5273 Angiosperm View MSA
121351432 5274 Embryophyte View MSA
123426590 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain