Gene : Cagra.1850s0026 C. grandiflora v1.1
Defline:  (1 of 68) PTHR32212:SF112 - FBD / LEUCINE RICH REPEAT DOMAINS CONTAINING PROTEIN-RELATED Genomic Order:  26
Name:  ? Cagra.1850s0026 Secondary Identifier:  ? PAC:28896487
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1850s0026 0.5kb upstream 0.5kb upstream 1994 true Scaffold1850: 105702-107695 Capsella grandiflora
Cagra.1850s0026 0.5kb upstream 0.5kb upstream 500 false Scaffold1850: 107196-107695 Capsella grandiflora
Cagra.1850s0026 0.5kb downstream 0.5kb downstream 1994 true Scaffold1850: 105202-107195 Capsella grandiflora
Cagra.1850s0026 0.5kb downstream 0.5kb downstream 500 false Scaffold1850: 105202-105701 Capsella grandiflora
Cagra.1850s0026 1.0kb upstream 1.0kb upstream 2494 true Scaffold1850: 105702-108195 Capsella grandiflora
Cagra.1850s0026 1.0kb upstream 1.0kb upstream 1000 false Scaffold1850: 107196-108195 Capsella grandiflora
Cagra.1850s0026 1.0kb downstream 1.0kb downstream 2494 true Scaffold1850: 104702-107195 Capsella grandiflora
Cagra.1850s0026 1.0kb downstream 1.0kb downstream 1000 false Scaffold1850: 104702-105701 Capsella grandiflora
Cagra.1850s0026 2.0kb upstream 2.0kb upstream 3494 true Scaffold1850: 105702-109195 Capsella grandiflora
Cagra.1850s0026 2.0kb upstream 2.0kb upstream 2000 false Scaffold1850: 107196-109195 Capsella grandiflora
Cagra.1850s0026 2.0kb downstream 2.0kb downstream 3494 true Scaffold1850: 103702-107195 Capsella grandiflora
Cagra.1850s0026 2.0kb downstream 2.0kb downstream 2000 false Scaffold1850: 103702-105701 Capsella grandiflora
Cagra.1850s0026 5.0kb upstream 5.0kb upstream 6494 true Scaffold1850: 105702-112195 Capsella grandiflora
Cagra.1850s0026 5.0kb upstream 5.0kb upstream 5000 false Scaffold1850: 107196-112195 Capsella grandiflora
Cagra.1850s0026 5.0kb downstream 5.0kb downstream 6494 true Scaffold1850: 100702-107195 Capsella grandiflora
Cagra.1850s0026 5.0kb downstream 5.0kb downstream 5000 false Scaffold1850: 100702-105701 Capsella grandiflora
Cagra.1850s0026 10.0kb upstream 10.0kb upstream 11494 true Scaffold1850: 105702-117195 Capsella grandiflora
Cagra.1850s0026 10.0kb upstream 10.0kb upstream 10000 false Scaffold1850: 107196-117195 Capsella grandiflora
Cagra.1850s0026 10.0kb downstream 10.0kb downstream 11494 true Scaffold1850: 95702-107195 Capsella grandiflora
Cagra.1850s0026 10.0kb downstream 10.0kb downstream 10000 false Scaffold1850: 95702-105701 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378628 5261 Brassicaceae View MSA
123801939 5264 Brassicales-Malvales View MSA
124299185 5266 SBM View MSA
124150666 5268 Malvidae View MSA
124073024 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain