Gene : Cagra.1876s0007 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31384:SF27 - AUXIN RESPONSE FACTOR 10-RELATED Genomic Order:  7
Name:  ? Cagra.1876s0007 Secondary Identifier:  ? PAC:28903297
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1876s0007 0.5kb upstream 0.5kb upstream 3258 true Scaffold1876: 36005-39262 Capsella grandiflora
Cagra.1876s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold1876: 38763-39262 Capsella grandiflora
Cagra.1876s0007 0.5kb downstream 0.5kb downstream 3258 true Scaffold1876: 35505-38762 Capsella grandiflora
Cagra.1876s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold1876: 35505-36004 Capsella grandiflora
Cagra.1876s0007 1.0kb upstream 1.0kb upstream 3758 true Scaffold1876: 36005-39762 Capsella grandiflora
Cagra.1876s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold1876: 38763-39762 Capsella grandiflora
Cagra.1876s0007 1.0kb downstream 1.0kb downstream 3758 true Scaffold1876: 35005-38762 Capsella grandiflora
Cagra.1876s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold1876: 35005-36004 Capsella grandiflora
Cagra.1876s0007 2.0kb upstream 2.0kb upstream 4758 true Scaffold1876: 36005-40762 Capsella grandiflora
Cagra.1876s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold1876: 38763-40762 Capsella grandiflora
Cagra.1876s0007 2.0kb downstream 2.0kb downstream 4758 true Scaffold1876: 34005-38762 Capsella grandiflora
Cagra.1876s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold1876: 34005-36004 Capsella grandiflora
Cagra.1876s0007 5.0kb upstream 5.0kb upstream 7758 true Scaffold1876: 36005-43762 Capsella grandiflora
Cagra.1876s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold1876: 38763-43762 Capsella grandiflora
Cagra.1876s0007 5.0kb downstream 5.0kb downstream 7758 true Scaffold1876: 31005-38762 Capsella grandiflora
Cagra.1876s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold1876: 31005-36004 Capsella grandiflora
Cagra.1876s0007 10.0kb upstream 10.0kb upstream 12758 true Scaffold1876: 36005-48762 Capsella grandiflora
Cagra.1876s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold1876: 38763-48762 Capsella grandiflora
Cagra.1876s0007 10.0kb downstream 10.0kb downstream 12758 true Scaffold1876: 26005-38762 Capsella grandiflora
Cagra.1876s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold1876: 26005-36004 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369503 5261 Brassicaceae View MSA
123835417 5264 Brassicales-Malvales View MSA
124337100 5266 SBM View MSA
124254214 5268 Malvidae View MSA
124069871 5270 Rosid View MSA
123753762 5271 Pentapetalae View MSA
122789105 5272 Eudicot View MSA
122049915 5273 Angiosperm View MSA
121351445 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain