Gene : Cagra.1822s0085 C. grandiflora v1.1
Defline:  (1 of 1) PTHR19957//PTHR19957:SF118 - SYNTAXIN Genomic Order:  85
Name:  ? Cagra.1822s0085 Secondary Identifier:  ? PAC:28905125
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Ontology Annotation Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1822s0085 0.5kb upstream 0.5kb upstream 2267 true Scaffold1822: 362630-364896 Capsella grandiflora
Cagra.1822s0085 0.5kb upstream 0.5kb upstream 500 false Scaffold1822: 362630-363129 Capsella grandiflora
Cagra.1822s0085 0.5kb downstream 0.5kb downstream 2267 true Scaffold1822: 363130-365396 Capsella grandiflora
Cagra.1822s0085 0.5kb downstream 0.5kb downstream 500 false Scaffold1822: 364897-365396 Capsella grandiflora
Cagra.1822s0085 1.0kb upstream 1.0kb upstream 2767 true Scaffold1822: 362130-364896 Capsella grandiflora
Cagra.1822s0085 1.0kb upstream 1.0kb upstream 1000 false Scaffold1822: 362130-363129 Capsella grandiflora
Cagra.1822s0085 1.0kb downstream 1.0kb downstream 2767 true Scaffold1822: 363130-365896 Capsella grandiflora
Cagra.1822s0085 1.0kb downstream 1.0kb downstream 1000 false Scaffold1822: 364897-365896 Capsella grandiflora
Cagra.1822s0085 2.0kb upstream 2.0kb upstream 3767 true Scaffold1822: 361130-364896 Capsella grandiflora
Cagra.1822s0085 2.0kb upstream 2.0kb upstream 2000 false Scaffold1822: 361130-363129 Capsella grandiflora
Cagra.1822s0085 2.0kb downstream 2.0kb downstream 3767 true Scaffold1822: 363130-366896 Capsella grandiflora
Cagra.1822s0085 2.0kb downstream 2.0kb downstream 2000 false Scaffold1822: 364897-366896 Capsella grandiflora
Cagra.1822s0085 5.0kb upstream 5.0kb upstream 6767 true Scaffold1822: 358130-364896 Capsella grandiflora
Cagra.1822s0085 5.0kb upstream 5.0kb upstream 5000 false Scaffold1822: 358130-363129 Capsella grandiflora
Cagra.1822s0085 5.0kb downstream 5.0kb downstream 6767 true Scaffold1822: 363130-369896 Capsella grandiflora
Cagra.1822s0085 5.0kb downstream 5.0kb downstream 5000 false Scaffold1822: 364897-369896 Capsella grandiflora
Cagra.1822s0085 10.0kb upstream 10.0kb upstream 11767 true Scaffold1822: 353130-364896 Capsella grandiflora
Cagra.1822s0085 10.0kb upstream 10.0kb upstream 10000 false Scaffold1822: 353130-363129 Capsella grandiflora
Cagra.1822s0085 10.0kb downstream 10.0kb downstream 11767 true Scaffold1822: 363130-374896 Capsella grandiflora
Cagra.1822s0085 10.0kb downstream 10.0kb downstream 10000 false Scaffold1822: 364897-374896 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364948 5261 Brassicaceae View MSA
123837156 5264 Brassicales-Malvales View MSA
124350252 5266 SBM View MSA
124240766 5268 Malvidae View MSA
124064346 5270 Rosid View MSA
123743910 5271 Pentapetalae View MSA
122788324 5272 Eudicot View MSA
122042907 5273 Angiosperm View MSA
121348883 5274 Embryophyte View MSA
123381058 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain