Gene : Cagra.1838s0011 C. grandiflora v1.1
Defline:  (1 of 4) PTHR11751:SF431 - 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 4-RELATED Genomic Order:  11
Name:  ? Cagra.1838s0011 Secondary Identifier:  ? PAC:28918369
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora ETHYL-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-7270 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1838s0011 0.5kb upstream 0.5kb upstream 2071 true Scaffold1838: 34647-36717 Capsella grandiflora
Cagra.1838s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold1838: 34647-35146 Capsella grandiflora
Cagra.1838s0011 0.5kb downstream 0.5kb downstream 2071 true Scaffold1838: 35147-37217 Capsella grandiflora
Cagra.1838s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold1838: 36718-37217 Capsella grandiflora
Cagra.1838s0011 1.0kb upstream 1.0kb upstream 2571 true Scaffold1838: 34147-36717 Capsella grandiflora
Cagra.1838s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold1838: 34147-35146 Capsella grandiflora
Cagra.1838s0011 1.0kb downstream 1.0kb downstream 2571 true Scaffold1838: 35147-37717 Capsella grandiflora
Cagra.1838s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold1838: 36718-37717 Capsella grandiflora
Cagra.1838s0011 2.0kb upstream 2.0kb upstream 3571 true Scaffold1838: 33147-36717 Capsella grandiflora
Cagra.1838s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold1838: 33147-35146 Capsella grandiflora
Cagra.1838s0011 2.0kb downstream 2.0kb downstream 3571 true Scaffold1838: 35147-38717 Capsella grandiflora
Cagra.1838s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold1838: 36718-38717 Capsella grandiflora
Cagra.1838s0011 5.0kb upstream 5.0kb upstream 6571 true Scaffold1838: 30147-36717 Capsella grandiflora
Cagra.1838s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold1838: 30147-35146 Capsella grandiflora
Cagra.1838s0011 5.0kb downstream 5.0kb downstream 6571 true Scaffold1838: 35147-41717 Capsella grandiflora
Cagra.1838s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold1838: 36718-41717 Capsella grandiflora
Cagra.1838s0011 10.0kb upstream 10.0kb upstream 11571 true Scaffold1838: 25147-36717 Capsella grandiflora
Cagra.1838s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold1838: 25147-35146 Capsella grandiflora
Cagra.1838s0011 10.0kb downstream 10.0kb downstream 11571 true Scaffold1838: 35147-46717 Capsella grandiflora
Cagra.1838s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold1838: 36718-46717 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362882 5261 Brassicaceae View MSA
123798444 5264 Brassicales-Malvales View MSA
124296078 5266 SBM View MSA
124247956 5268 Malvidae View MSA
124066319 5270 Rosid View MSA
123745403 5271 Pentapetalae View MSA
122791160 5272 Eudicot View MSA
122042730 5273 Angiosperm View MSA
121351183 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain